Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00365 ATGGCGTCTGGGTCGTCAGGTCGGGCCAACGCGAGCTCTAAGGGGTTCGATTTTGGTTCTGATGATATACTTTGCTCGTACGAGGACTATGATAACCAAGACTCTTCTAACGACGGCCATGGTGATGCTGCGGTGTGCGCCAATCCGAGCAAGGATTTTAATAAAAGTAGAGTGACAAGATCTGCTGTTTTTCCTGCTGCTGTAAATAACCAGCCAGAAGATTCCTTAAACCAAGATGTTCTTTCTTCAGTTGATAGAGGGATGAAAAAACACACTGACAGTGTTATGCGCATTCTTGAAGGAATCAGTTCACGCTTGTCTCAGCTGGAAAAGTATTGCTACAACCTTGACAAATCAATTGGAGAAATGAGAGCTGATCTAGTTCGTGTTCATGGAGAGGCGGACTCAAAACTGAAATCTCTTGACAAACATGTTCAAGAAGTCCACCGATCAGTTCAGATTTTGAGGGACAAACAAGAACTTGCTGAGACTCAAAAAGAGTTGGCCAAGCTTCAGCTTGTCCAAAAAGAATCAACTTTGTCAAGTCATTCGCAATCTAATGAGCAGAGAGCTTCGCAACAACCATCTGAGCCTAAGAAAACCGACGACTCATCTGAGGCAACAAATCAGCAGTTAGCTCTTGCCTTGCCACAGCAGGTTACTCCTCCGCAACAGTCCATTCCACCAGCTGCCCCGCAGAATGTAAGTCAACAGCAATCCTATTATGTGCCTCAGACCCAATTGTCAAATACCCCAGCCCCAGCCCAACTACCTCAGAGTTATCTCCCTCCCAATCCTCAATACCGACCTCCCCAACTTCAAGAAGGGGGTCAGGTGGCCCCACAGTCAATATATTCTCAGCCTCAAAGCCAAACGCCCCAATTCCAACAACCATTTACTCAGTATCAGCAACCATGGCCTCAGCAGCTACCTCCTCAGGTCCAACCACCACAGCAAACTCATGTTCGGCCACCACCACAATCAGTTTATCCTTCCTTCCCTCCAAGTCAACCCACCAACCCTTCCACCCCAGAAACTTTGCCCAATAGCATGCCAATGCAAGTGCCATTTTCATCTATTCCTCAGCCAGGACCTGGTCGTGTAGACACTATGCCCTATGGATATGGTGGACCTGGCAGACCCGTTCTACAGCAGCATCTGGCCCCGCAAATGATGGGCAGTTTTGGTGCACAAGTGGGTGATGGGTATGCAAATTCTGGCTCACATCCTGCTCTTCCTGCAGGAAATGTATATGTGGTGTATGATAATAACGGAGTAAGAACACACAATCCACCTCCACAACCTCAATACAATCCAGGTGGTTATCCTCCTACGAGTGTTCCTCTTCCGAATGCACAACCAATAGCATATCCTCCAACTAGTGTTTCTTTTCAGAATGCGCCACCAGCTACATATCCTGCAACTAGTGCTTCTCTTCAGAATGCACGACCAGCCATTGTCCAGAACTCAAGTCATTCACAATTTGCTCGTAATAATCCTCACTCCGAGCTTATTGAGAAATTGGGCAATATGGGTTTCAGGAGCGATCACGTTGTCGGCGTGATTCAGAGGCTGGAGGAAAGTGGTCAGCCTGTTGATTTTAACTCTGTTCTGGACAGGTTGAAGGAACGGATCATTTGGCTTTCGCTTTCGTTCTCTCGCGTTCCGCTCTGTGCAAGCATTATGGAGACGCCCCTGCTGAGCGGGGAGAGCAGCGGGAGTCACAGTGGTTGCCCGGACGATCCCCATTTGAAATTCAAACGCCGCTCTGACGCTATTACTTATGGCTCGTCGTATCAAAGAGCAGCGGCCCTTGTTGATCTGGCTGAAGATGGTGTTGGTATACCGGAGCAGATTCTTGAACATTCAAGCTTTCACAATGCAGCCAAGTTCTACTTCATTTTTATCAGACTTGATTTTATATGGACTCTCAATTACTTTGCACTGATTGCCCTTAATTTCTTTGAGAAACCCTTGTGGTGCTCCAAACATACCACATATACTTGCAGCGATAGAGATTATTTCTATCTTGGGGAGTTGCCTTACCTAACTAGTGCTGAGTCTCTAACCTACGAGGGCGTAACTCTCATGGTGCTTCTAATTCATACTTCCTTTCCAATTACGTATGAAGGGTTCAACCTCTTTTGGAAAAATTCTTTAAATAAATTAAAGGTTGCTTGCCTTCTGATATTGGTGGCTGACTTACTAGTTTATACTGTATATTTGTCCCCTGTGGCCATTGATTACCTTCCGTTCAGACTTGCTCCATACATAAGAGTTGTCTTTTTCATCATGAATATCAGGGATTTACGTGATAGCATCGTCATCCTGGCTGGAATGCTGGGCACATATTTGAACGTCTTGGCTTTGGGGATTTTATTTCTTGTTTTCTGCAGTTGGGTAGCATATGTCATGTTTGAAGATACGCAAGAAGGAAAAGCTGTATTTACATCATTTGGTACCACATTATATCAAATGTTTGTTTTATTTACCACATCCAACAATCCAGATGTTTGGATACCAGCATACAAGGCTTCACGGTGGTATTGCTTGTTTTTTGTCCTCTATGTGCTATTGGGAGTATATTTTGTCACAAACTTGGTCCTTGCTGTTGTATATGACAGTTTTAAAAGTCAGCTCGTAAAGCAAGTTTCAGAGAAGGATCGCAAAAGGATAAGTACATTGCAGAAAGCGTTTAGTCTTATAGATAGTAATAATGATGGATTTATTGAAAAAGAGCAGTGCATACAACTGTTTGAAGAGCTGAACAAATACAGGTCTTTGCCAAAGATATCAAAGGACGACTTTGAATTAATATTTGATGAGTTGGATGATAGTCGTGATTTCAAGATTAACGTGGATGAATTTGCTGATCTATGCAATGCAATTGCTCTGAAATTCCAAAAGGAGGATACTCCGTCTTGGTTGGAACAGTACCCATACTTCTATCATTCATCTGCGTCGGAGATGTTGAAAACCTTCATTCGAAGCCCTAAATTTGGATACTTAATATCTTCCATTCTCGTGTTGAATCTAGTAGCAGTTATTATCGAGACAACACTTGATATAGAGAACAGTTCGGGCCAAAAAATATGGCAAGAGGTGGAATTTGTATTCGGATGGATATATGTCGTGGAGATGGCTCTAAAAGTATATTCATATGGATTTGAGAATTATTGGAGAGAAGGTGAAAATCGGTTCGATTTTGTTGTCACGTGGGTAATAGTTATCGGAGAAACTATAACGTTTGTGTCCCCCAATGGGTTAACTTTTCTTTCAAATGGAGAATGGTACGAGGATTTCCTTTATTTCATATGCTTTTTTGCGGTCAACGACAATTCAAACCCTGGAGATTATTTTTTAACAACTAAAACCCTGAACTATGAGAAAATGTCGCCGGCGACCTCGCAGTCACGATTTCCGTCCAGAGCCGTCGAGGTTAACGCCCCGTTTGTACCCTGTCTAGCGGCGTCGAACGGAGTCGAAGGGCGATGGCAGAGCCGACGGTCGAATCGTCCAGAGCCGACCGAAGTACGACATTCGCTGGCCGTTGGATCGACGAGGATCGTCCCTCGTCTGGATCGATGGCCAGGATTGAATCTAGCGTCCCTACCAGATGCGATGACGGACAAAGATTCTTGGCCGTTGGATCGAGTGAGGGACGTGCCTCGGATCGATGGCCAGGATTTAATCCGCCTGGCGAAGACGGACGTCGATCCTTGTCCGTTGGATTCTCGCCTGGATCGAACGGTCAGTAGTGACTCCAAATTAATTGGGTCACGTGCGGGTCACATGCGATCCTAA 3804 44.85 MASGSSGRANASSKGFDFGSDDILCSYEDYDNQDSSNDGHGDAAVCANPSKDFNKSRVTRSAVFPAAVNNQPEDSLNQDVLSSVDRGMKKHTDSVMRILEGISSRLSQLEKYCYNLDKSIGEMRADLVRVHGEADSKLKSLDKHVQEVHRSVQILRDKQELAETQKELAKLQLVQKESTLSSHSQSNEQRASQQPSEPKKTDDSSEATNQQLALALPQQVTPPQQSIPPAAPQNVSQQQSYYVPQTQLSNTPAPAQLPQSYLPPNPQYRPPQLQEGGQVAPQSIYSQPQSQTPQFQQPFTQYQQPWPQQLPPQVQPPQQTHVRPPPQSVYPSFPPSQPTNPSTPETLPNSMPMQVPFSSIPQPGPGRVDTMPYGYGGPGRPVLQQHLAPQMMGSFGAQVGDGYANSGSHPALPAGNVYVVYDNNGVRTHNPPPQPQYNPGGYPPTSVPLPNAQPIAYPPTSVSFQNAPPATYPATSASLQNARPAIVQNSSHSQFARNNPHSELIEKLGNMGFRSDHVVGVIQRLEESGQPVDFNSVLDRLKERIIWLSLSFSRVPLCASIMETPLLSGESSGSHSGCPDDPHLKFKRRSDAITYGSSYQRAAALVDLAEDGVGIPEQILEHSSFHNAAKFYFIFIRLDFIWTLNYFALIALNFFEKPLWCSKHTTYTCSDRDYFYLGELPYLTSAESLTYEGVTLMVLLIHTSFPITYEGFNLFWKNSLNKLKVACLLILVADLLVYTVYLSPVAIDYLPFRLAPYIRVVFFIMNIRDLRDSIVILAGMLGTYLNVLALGILFLVFCSWVAYVMFEDTQEGKAVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLVLAVVYDSFKSQLVKQVSEKDRKRISTLQKAFSLIDSNNDGFIEKEQCIQLFEELNKYRSLPKISKDDFELIFDELDDSRDFKINVDEFADLCNAIALKFQKEDTPSWLEQYPYFYHSSASEMLKTFIRSPKFGYLISSILVLNLVAVIIETTLDIENSSGQKIWQEVEFVFGWIYVVEMALKVYSYGFENYWREGENRFDFVVTWVIVIGETITFVSPNGLTFLSNGEWYEDFLYFICFFAVNDNSNPGDYFLTTKTLNYEKMSPATSQSRFPSRAVEVNAPFVPCLAASNGVEGRWQSRRSNRPEPTEVRHSLAVGSTRIVPRLDRWPGLNLASLPDAMTDKDSWPLDRVRDVPRIDGQDLIRLAKTDVDPCPLDSRLDRTVSSDSKLIGSRAGHMRS 1267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 21225870 21247722 - BLOR05646 Blo13g00365 68760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00365 1267 MobiDBLite consensus disorder prediction 205 221 - -
Blo13g00365 1267 MobiDBLite consensus disorder prediction 309 342 - -
Blo13g00365 1267 Gene3D - 878 978 - -
Blo13g00365 1267 ProSiteProfiles EF-hand calcium-binding domain profile. 890 925 IPR002048 GO:0005509
Blo13g00365 1267 Coils Coil 154 174 - -
Blo13g00365 1267 CDD EFh 895 959 IPR002048 GO:0005509
Blo13g00365 1267 Pfam UBA-like domain (DUF1421) 502 542 IPR010820 -
Blo13g00365 1267 MobiDBLite consensus disorder prediction 230 256 - -
Blo13g00365 1267 Pfam Ion transport protein 1000 1078 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo13g00365 1267 Pfam Ion transport protein 697 879 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo13g00365 1267 SUPERFAMILY Voltage-gated potassium channels 997 1082 - -
Blo13g00365 1267 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 562 1099 IPR044581 GO:0005245
Blo13g00365 1267 MobiDBLite consensus disorder prediction 276 308 - -
Blo13g00365 1267 MobiDBLite consensus disorder prediction 175 194 - -
Blo13g00365 1267 ProSiteProfiles EF-hand calcium-binding domain profile. 931 966 IPR002048 GO:0005509
Blo13g00365 1267 Gene3D - 990 1097 IPR027359 -
Blo13g00365 1267 Gene3D - 769 877 - -
Blo13g00365 1267 MobiDBLite consensus disorder prediction 29 50 - -
Blo13g00365 1267 SUPERFAMILY EF-hand 874 963 IPR011992 -
Blo13g00365 1267 SMART efh_1 935 963 IPR002048 GO:0005509
Blo13g00365 1267 SMART efh_1 894 922 IPR002048 GO:0005509
Blo13g00365 1267 MobiDBLite consensus disorder prediction 175 350 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00073 Blo13g00365 CCT
Blo04g00692 Blo13g00365 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00693 Blo-Chr4:6317270 Blo13g00365 Blo-Chr13:21225870 0 dispersed
Blo11g00657 Blo-Chr11:6986881 Blo13g00365 Blo-Chr13:21225870 2.61E-17 dispersed
Blo13g00365 Blo-Chr13:21225870 Blo16g00119 Blo-Chr16:2747048 2.40E-69 dispersed
Blo17g00306 Blo-Chr17:3213642 Blo13g00365 Blo-Chr13:21225870 3.75E-24 dispersed
Blo01g01627 Blo-Chr1:56154477 Blo13g00365 Blo-Chr13:21225870 1.69E-72 transposed
Blo03g00039 Blo-Chr3:1670594 Blo13g00365 Blo-Chr13:21225870 3.29E-84 transposed
Blo13g00365 Blo-Chr13:21225870 Blo15g00565 Blo-Chr15:11463160 4.76E-147 wgd
Blo13g00365 Blo-Chr13:21225870 Blo02g00073 Blo-Chr2:493915 1.33E-152 wgd
Blo13g00365 Blo-Chr13:21225870 Blo04g00692 Blo-Chr4:6311901 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00365 K16900 - csv:101206980 846.654