Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00371 ATGCCAAACAACGGGATTAACGGTACAAATAAAGACTTGAGACTCGCAATGACCAAAACGCCCCCAAGTGGAGTTAACGCCGTAATCAGTCGTTCATCTTGTAACAGTCGGCAAATCACCCTCAAATCAAGGCTTGATCTGTTTTTCTCTTGGCTTTCTCGCCCGTCGGTGAAAGACATTGCCGCCGGAGAAAGCACTAACCCGCCATTGCCGATGGCCAAGATCCTCGATAGACTATCATTTGGACTGTGGATTGCGACGGTGAGCTTGCTGCTGTTAGGAAATAGTTTGGTCGAGTCCGCTCATCTTAAGCACAACGTCTCATCCGCGCATTGGCTTCCCGCTACAGCCACTTGGTACGGAAGCCCAGAAGGCGACGGAAGCGACGGAGGAGCGTGTGGGTATGGAAACTTAGTGGATGTGAAGCCATTGAGGGCAAGGGTAGGCGCGGTGAGCCCAGTTTTGTTCAAGAATGGCGAGGGCTGCGGAGCTTGCTTCAAGGTAAAGTGCTTGGACCAAACCATATGCACTAGACGAGCAGTGACTATAATCGTTACAGACGAGTGCCCCGGTGGCTACTGTGCCGGTGGCCGCACCCACTTCGACCTCAGCGGCGCCGCCTTCGGCCACATGGCTGTAGCCGGTGAAGGTGGGCACCTCAGGAACAGAGGCGAAATCCCAGTCATCTACAAAAGGACTCAATGCAAATATCCGGGCAAGAACATAGCTTTCCACGTGAACGAAGGTTCGACAGATTACTGGTTCTCGCTCCTGGTTGAGTTCGAGGATGGCGATGGAGATATTGCGTCAATGCAGATAAGAGAAGCAAGCTCTGATAAATGGTTGGAGATGAATCATCTATGGGGTGCGAATTGGTGTGTTATCGGAGGGCCGCTAAAAGGGCCATTTTCGGTGAAAGTTAGGACATTGTCGACGGCCAGAACTCTATCAGCCAGGGACGTGATTCCAAGCAACTGGTCTCCTAAAGCCACTTATCCGTCTCGCTTGAAATTCATCTCCTAA 1023 51.71 MPNNGINGTNKDLRLAMTKTPPSGVNAVISRSSCNSRQITLKSRLDLFFSWLSRPSVKDIAAGESTNPPLPMAKILDRLSFGLWIATVSLLLLGNSLVESAHLKHNVSSAHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLRARVGAVSPVLFKNGEGCGACFKVKCLDQTICTRRAVTIIVTDECPGGYCAGGRTHFDLSGAAFGHMAVAGEGGHLRNRGEIPVIYKRTQCKYPGKNIAFHVNEGSTDYWFSLLVEFEDGDGDIASMQIREASSDKWLEMNHLWGANWCVIGGPLKGPFSVKVRTLSTARTLSARDVIPSNWSPKATYPSRLKFIS 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 21519812 21521649 + BLOR05652 Blo13g00371 68766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00371 340 Pfam Lytic transglycolase 150 228 IPR009009 -
Blo13g00371 340 Gene3D - 236 335 IPR036749 -
Blo13g00371 340 PANTHER EXPANSIN-LIKE PROTEIN B1 98 339 - -
Blo13g00371 340 SMART dpbb_1 148 230 IPR007112 -
Blo13g00371 340 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 253 334 IPR007117 -
Blo13g00371 340 PANTHER EXPANSIN-B3 98 339 - -
Blo13g00371 340 Pfam Expansin C-terminal domain 242 323 IPR007117 -
Blo13g00371 340 PRINTS Major pollen allergen Lol pI signature 310 327 IPR005795 GO:0005576|GO:0019953
Blo13g00371 340 PRINTS Major pollen allergen Lol pI signature 150 161 IPR005795 GO:0005576|GO:0019953
Blo13g00371 340 PRINTS Major pollen allergen Lol pI signature 260 275 IPR005795 GO:0005576|GO:0019953
Blo13g00371 340 PRINTS Major pollen allergen Lol pI signature 212 227 IPR005795 GO:0005576|GO:0019953
Blo13g00371 340 PRINTS Major pollen allergen Lol pI signature 244 259 IPR005795 GO:0005576|GO:0019953
Blo13g00371 340 PRINTS Major pollen allergen Lol pI signature 190 205 IPR005795 GO:0005576|GO:0019953
Blo13g00371 340 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 130 240 IPR007112 -
Blo13g00371 340 SUPERFAMILY PHL pollen allergen 240 333 IPR036749 -
Blo13g00371 340 PRINTS Expansin/Lol pI family signature 152 170 IPR007118 GO:0005576
Blo13g00371 340 PRINTS Expansin/Lol pI family signature 281 295 IPR007118 GO:0005576
Blo13g00371 340 PRINTS Expansin/Lol pI family signature 223 239 IPR007118 GO:0005576
Blo13g00371 340 PRINTS Expansin/Lol pI family signature 320 334 IPR007118 GO:0005576
Blo13g00371 340 PRINTS Expansin/Lol pI family signature 129 147 IPR007118 GO:0005576
Blo13g00371 340 PRINTS Expansin/Lol pI family signature 111 126 IPR007118 GO:0005576
Blo13g00371 340 SUPERFAMILY Barwin-like endoglucanases 105 239 IPR036908 -
Blo13g00371 340 Gene3D - 96 235 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00054 Blo-Chr7:773870 Blo13g00371 Blo-Chr13:21519812 1.09E-57 dispersed
Blo09g00161 Blo-Chr9:5114836 Blo13g00371 Blo-Chr13:21519812 1.02E-40 dispersed
Blo13g00371 Blo-Chr13:21519812 Blo03g00184 Blo-Chr3:4497430 7.80E-37 dispersed
Blo19g00238 Blo-Chr19:12243645 Blo13g00371 Blo-Chr13:21519812 1.23E-26 dispersed
Blo13g00371 Blo-Chr13:21519812 Blo02g00081 Blo-Chr2:558897 5.46E-105 wgd
Blo13g00371 Blo-Chr13:21519812 Blo04g00689 Blo-Chr4:6286723 1.72E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00371 K20628 - csv:101202998 442.195