Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00379 ATGGCGGTCTGTGTCTCCACTGGCAGCCGAGCCAGCCAAAACGGCAGAATCCAGGGGAAGAAGGTTCCTCCATCTTGCCTCGGGAAGAGTTTCGATGGACGGAAAAGATCAAAGACGACATTTTCCAATCATGTAATCGGCCTGAAACAACTCTCCTCGATTCCAAACCGGGTTTGCGTAAATGGAAAGAGTCGAACGTCTTGCCTGTTCACTCAAAAAGGTCGTAAGGGGATCAACCAGGACACCATGATCGTATGGGAAGATTTCATTTCAGAGGGTGTAACTTTCTGTGGAGTGTTCGATGGTCACGGACCATACGGCCATCTCGTAGCTCGAAAAGTGATGGATTCGCTCCCATTAAAGCTACTTTCATTCTTGCATAATTCTCTGTCAAAGAAAGACGATGAAACCAACTTCGACTCGGCTGTGGATGATTCCAATTCCGGGTCCAATCTCTTCATCGGGAATGTAGGAGATTCTCGAGCAATCCTCGGCTCCAAGAACGACCGCGATTCCATGATAGCGATCCCGTTAACTGTGGATCTAAAGCCTGATTTGCGGAGTGAAGCCGAGAGGATAAAAAGGTGTAGAGGAAGGGTCTTCGCAATGCGAGATGAGCCTCTGGTTCCAAGAGTATGGCTGCCATTTGATGATGCTCCGGGGCTAGCAATGACTCGAGCTTTTGGCGATTTCTGCTTGAAGAAGTATGGAGTTATCTCTATTCCTGAGTTTTCCCACAGTAAACTTACTGACAGAGATCAATTTGTCGTTGTTGCCTCTGATGGGTCACTTCAAATTTTTCTAATCAATGTTGTAGTTGAACAAAGGTTAATTTGGGATGTGTTGAGCAATGAAGAGGTGGTTGAGATAGTGGCTTCGGCCACCGCACGATCATCAGCTGCTAGAATATTGGTCGAGTCTGCAGCTCGTGAGTGGAGGCTCAAATACCCGACTTCGAATATGGATGATTGTGCAGTGGTTTGCTTATTTTTGGACGGAAAAATGGACCCTGAATCAGATTGTGATGAACTTGGTTTTTCTTCTGCAACTATTCAAAGCAATAATTCTGGTAATGCCATGGAATCTGAGGATGGCCAGAAGTCTGACCCATCTCTGCAAAGAAACCACACAGGCAGGTTGGCCGAAGGGAAGAATGAACAAGTATCGGCCGAAGCTCTGAACTGGTCCGGTTTGGAGGGCGTTACACGATCACCCGTTCTGCCATTCCTCCTCATTTTCAGTTTTCTAGTCTTACACGAGCAAACTGCAGAGGGCCGGTACTTTCCGGGATACGCTGACCAGAAACATTCTGATTGGTTGATTGCAGAAGCTGGCACCATGTACATTCCGGGATACGGACGGATTCCGATTCCGCCGTATTATTCAGGCAATGTAGGAGGTCTAATCGGAACCATCAGCAATTACATTCCAAGGGGCGAGGACAGTTTGATGCCAAATCCTGGATTTGAATTCCCCCATCCCGAAAGAGATGCCGTTGCTTCGGCAAATGTTCTTCCTTGA 1521 47.34 MAVCVSTGSRASQNGRIQGKKVPPSCLGKSFDGRKRSKTTFSNHVIGLKQLSSIPNRVCVNGKSRTSCLFTQKGRKGINQDTMIVWEDFISEGVTFCGVFDGHGPYGHLVARKVMDSLPLKLLSFLHNSLSKKDDETNFDSAVDDSNSGSNLFIGNVGDSRAILGSKNDRDSMIAIPLTVDLKPDLRSEAERIKRCRGRVFAMRDEPLVPRVWLPFDDAPGLAMTRAFGDFCLKKYGVISIPEFSHSKLTDRDQFVVVASDGSLQIFLINVVVEQRLIWDVLSNEEVVEIVASATARSSAARILVESAAREWRLKYPTSNMDDCAVVCLFLDGKMDPESDCDELGFSSATIQSNNSGNAMESEDGQKSDPSLQRNHTGRLAEGKNEQVSAEALNWSGLEGVTRSPVLPFLLIFSFLVLHEQTAEGRYFPGYADQKHSDWLIAEAGTMYIPGYGRIPIPPYYSGNVGGLIGTISNYIPRGEDSLMPNPGFEFPHPERDAVASANVLP 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 21862877 21865187 + BLOR05660 Blo13g00379 68774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00379 506 CDD PP2Cc 65 331 IPR001932 -
Blo13g00379 506 ProSiteProfiles PPM-type phosphatase domain profile. 66 331 IPR001932 -
Blo13g00379 506 PANTHER ALPHABET, ISOFORM E-RELATED 1 133 - -
Blo13g00379 506 MobiDBLite consensus disorder prediction 352 375 - -
Blo13g00379 506 PANTHER ALPHABET, ISOFORM E-RELATED 146 396 - -
Blo13g00379 506 Gene3D - 146 341 IPR036457 -
Blo13g00379 506 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 133 - -
Blo13g00379 506 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 146 396 - -
Blo13g00379 506 SMART PP2C_4 55 329 IPR001932 -
Blo13g00379 506 SUPERFAMILY PP2C-like 61 333 IPR036457 -
Blo13g00379 506 MobiDBLite consensus disorder prediction 352 383 - -
Blo13g00379 506 Pfam Protein phosphatase 2C 148 306 IPR001932 -
Blo13g00379 506 Gene3D - 67 145 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00379 Blo15g00550 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00379 Blo-Chr13:21862877 Blo11g00408 Blo-Chr11:3551070 3.43E-94 dispersed
Blo13g00379 Blo-Chr13:21862877 Blo15g00550 Blo-Chr15:10759494 2.83E-157 wgd
Blo13g00379 Blo-Chr13:21862877 Blo02g00086 Blo-Chr2:590743 5.25E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00379 - - rcu:8262108 525.783