Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00406 ATGCACTTCCCTCCCCCGTCCTCCGACGATAAACGGATGATCCTGGACGAGATGAACTTCTACGCTGATGACAAACACCCTGATTCCTCTATTGACGCCGATGATAATAAATGCTCAGATATCCGGCACATTAAGATGGAGACTGGTTTGCATCTTCTTACCACTAATACCAGTAGCGATCAATCCATGGTGGACGACGGGATATCTCCTGATGCAGAGGATAAGAAATCTAAAAATGAGTTGGTAGTTTTGCAAGCTGAGCTAGAGAGGATGAACATGGAGAATCAACGTTTAAGAGATATGCTTAATCAAGTAAGCAGCAATTACCAGGCGTTGCAGATGCACTTAGTCAATTCAATGCTGCATAAAAAAACTGAGGAAATTGATAAACGCAGTGGAAATGGCGGAATACTGGTTCCAAGGCAATTCATGGATCTTGGTCTGGCTAATAATGCCGATGCCAATGAGCCGTCGCTGTCCTCATCAGAAGCGAATGACTGCCGGTCAGGATCACTGAGAAAAAACGGAGAATTTGCATTGGAGGGTACAGTGATTGAGAAAGAGAAGACGAATAGTCCTGATCAAGTTTCTCAAGAATGGGGAGGAAGCACGATTCCGAGGTTTAATCCTGGTAAAGACATTGATCAAACTGAGGCAACCATGAGAAAGGCTCGAGTTTCTGTTAGAGCTCGATCTGAGGAGCCTATGATCACAGATGGATGTCAATGGAGGAAATACGGGCAGAAAATGGCGAAGGGAAACCCATGTCCTCGAGCTTATTATCGGTGTACAATGGCCGCCGGCTGTCCGGTTCGAAAACAAGTGCAAAGGTGCGCAGAAGATCGGACGATTCTCATAACAACTTACGAAGGAAATCACAGCCATCCATTACCGGCGGCGGCGATGGCGATGGCCTCAACGACATCATCAGCGGCGAGAATGCTACTATCGGGATCGACGTCAAGCGCCGATCATAATCTGATGAACCCAAGTTTTCTGACAAAAACTCTCCTCCTAGGCTCCTCAAACATGGCTACAATCTCAGCCTCCGCCCCATTTCCCACTGTTACGCTAGACCTCACTCAAACACCCATCAACCCTTATCAATTTCAAAGGCCACAAAGCCCATTTCAAATCCCTTTTCCTAACCCATCTCCGAATTCCTCAGCCTCCTTCCTTCCTCAAATCTTAGGCCAGGCGTTGTACAACCAGTCTATGTTCTCTGGGCTGCAAATGTCGCAAGAGAGCGGCGGCCAGTTGGGTCAGCAAGGTGCGATGGCTGACATGCTCAGCGCTGCTACCGCGGCCATTGCTGCAGATCCAAACTTCGCGGCAGCGCTAGCCGCAGCAATCACTTCTATTATTGGAGGTGCTCAATCAGTCAAAAACAGCGACACGAATAACAGTAACAGTAGTAATAAAAACAGCAGTTCGAGTTTCTCAGGAAATTGA 1452 47.45 MHFPPPSSDDKRMILDEMNFYADDKHPDSSIDADDNKCSDIRHIKMETGLHLLTTNTSSDQSMVDDGISPDAEDKKSKNELVVLQAELERMNMENQRLRDMLNQVSSNYQALQMHLVNSMLHKKTEEIDKRSGNGGILVPRQFMDLGLANNADANEPSLSSSEANDCRSGSLRKNGEFALEGTVIEKEKTNSPDQVSQEWGGSTIPRFNPGKDIDQTEATMRKARVSVRARSEEPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHSHPLPAAAMAMASTTSSAARMLLSGSTSSADHNLMNPSFLTKTLLLGSSNMATISASAPFPTVTLDLTQTPINPYQFQRPQSPFQIPFPNPSPNSSASFLPQILGQALYNQSMFSGLQMSQESGGQLGQQGAMADMLSAATAAIAADPNFAAALAAAITSIIGGAQSVKNSDTNNSNSSNKNSSSSFSGN 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 23662684 23664499 - BLOR05687 Blo13g00406 68801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00406 483 MobiDBLite consensus disorder prediction 190 213 - -
Blo13g00406 483 Pfam WRKY DNA -binding domain 239 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00406 483 PANTHER OS05G0567200 PROTEIN 8 475 - -
Blo13g00406 483 SUPERFAMILY WRKY DNA-binding domain 231 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00406 483 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00406 483 MobiDBLite consensus disorder prediction 190 204 - -
Blo13g00406 483 Gene3D WRKY domain 222 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00406 483 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00406 483 MobiDBLite consensus disorder prediction 57 76 - -
Blo13g00406 483 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 475 IPR044810 GO:0003700
Blo13g00406 483 MobiDBLite consensus disorder prediction 460 483 - -
Blo13g00406 483 Coils Coil 74 108 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00154 Blo13g00406 CCT
Blo02g00154 Blo13g00406 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00406 Blo-Chr13:23662684 Blo14g00014 Blo-Chr14:93891 7.07E-125 dispersed
Blo16g00193 Blo-Chr16:4327158 Blo13g00406 Blo-Chr13:23662684 1.40E-44 dispersed
Blo10g00510 Blo-Chr10:11475591 Blo13g00406 Blo-Chr13:23662684 6.10E-27 transposed
Blo13g00406 Blo-Chr13:23662684 Blo15g00484 Blo-Chr15:7923766 1.50E-154 wgd
Blo13g00406 Blo-Chr13:23662684 Blo04g00658 Blo-Chr4:5790071 0 wgd
Blo13g00406 Blo-Chr13:23662684 Blo07g00896 Blo-Chr7:27777080 8.21E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13138 PF03106 WRKY 5.20E-24 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00406 - - zju:107414181 494.197