Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00458 ATGGTTGTTTCTTCCTGCGGAAATCAAAGACCGGCCGTCATGGTCTTCGTTTTTCTCTTTGTGTTGATATCAATGGCTACTGGAGGTAGCTCGGCGTCTCTTACAGAGTATTTGCACAATGTTGGGTTCGATGAAGGAAACGACAGGTGGAAGTTTGGTTTCCCCGGAGATTCTTCCATTGACGGTGGGGCTCTACAGTTAACTCCGGACACTGAGAATCAAGACTTCAGCTTCAAAAATAAGTCGGGAAGAATCATGTATAACCAACCGTTTAAGCTCTGGTCATCGGAAGTCGGAGTTAATGGAGATGACGTAGTCGCTTCGTTTAAGACGTTTTTCGTCATTAATATTTACAGACAAGCATCGTGGAACGCCGGAGAAGGATTCGCTTTTCTTATAGCTCCAGATTCCGATAGTATTCCGGTGGGGAGCTTTGGGCAGTGGCTTGGCCTCACTAATTCGACGATCGACGGCAAAGCTTCGAACCACATCGTTGCAGTGGAATTTGATACGGAAAAGCAAGATTTCGACATAGATGATAACCACATCGGATTAAACATAAACTCGATTAGGTCAAACAAATCAGTTTCTCTCACCGGAATGGGGATCGAGATTTCTCCCGCGGTTGCGATGAATTACAGCGTCTGGATTCAGTACAACGGCAGCTCCAAAGTAATGGAGGTTTACATGGCGAAGCAAAAAGATCCGCAACCGGAGAATCCGATTTTGAGAGAGACGATAAATCTCAAAACAGTCGTGAATCAAGAATCCTACTTCGGATTCGCTGGATCCACCGGAGATCTGGCGGTTCAGTTGAACTGCGTTCTGGAATGGAGACTGGATGTGGAAGATCTACGGAAAAAGGATCAGAAATGGTTGAAAATCACCGCCGCCATTGTTGTCCCGCTTTTCGTCGCCTTGCTTATAATGGGAGTTTATTTCGGACAGAAATATAGAAAGAGGAGGAAGAAGAGGATAGACGAGGAATCGAGCGTCCTAGGAACTTTGAAAAGCTTGCCTGGAATACCGAGGGAGTTTCAGCTCAAGGAGATGAAGAAGGCGACGAGAAACTTCCACCCAAGCTTAGAGCTCGGAAGAGGAGGATTCGGCGTGGTCTACAAAGGAATTCTCGCCGGAAACGGAGAAGAAGCAAGAACAGAGATCGCGGTGAAGCAATTCTCGGGGGATAGCATGGTGGGAAAAGATGATTTCTTGGCCGAGCTCACGATTATCCACCGGCTCCGGCACAAACATCTGGTCCGATTAGTAGCGGATTCAAGATTTGATCTTGTTCGTCCATTCTTAAGAGTTGTGATTAACGATGATGAATATGAATTCTGGCCTGGGTATTTCAGAGAGATCATTTCTTTTTTTGGTCCAGGGTGGTGTTATGAGAGACGAAAGCTTCTGCTCGTCTACGATTTCATGCCTAATGGCAGCTTGGAGAAGCACCTCTACTGCTCCGACGATCAGAAAGTGTTGAGTTGGGGAAGACGATGCAAGATTTTGGAAGGCGTCGCCTCGGCGCTGCATTATCTCCACAACGAGTTCGATCAGAAAGTGCTCCACCGCGATCTTAAGTCCAGTAACATATTGCTTGATTCCGAATTCAACGCTCGCCTCGGAGATTTCGGTCTCGCCCGGGCTCTAGATCCCGAGAGGAACTCCTACGCTGACATCAGACTCGCCGGAGTTCCTGGTACCGTCGGTTACGTCGCTCCAGAATGCTTCCACACCGGCAGAGCCACGCCGGATTCGGATGTGTTCGGATTCGGAGCCGTCGTGCTCGAGATCGTTTGCGGGAGAAATCCAGGCGCCAGCGTTCAAAGCGGCGAGCATTTCTACAACTTGATCGAGTGGGTTTGGCTGTTTCACCGCGACGAACAGATTGAGAAAGCGGTGGACAAGCGGCTGCAGAATGACGTCGTGGTTGAAGAAGCGAAGAAACTTCTCCTACTAGGTCTCGCTTGTTCTCACCCGATCGCCGGGGAGCGACCTTCTACGCAGGCTATTGTTCAGATTGTATCCGGAACATCACCGGCGCCGTACGTTCCCCCGTTCCGTCCGGTCTTCACCTGGCCTTCGATGGACACCACGGGCGGCACCACCACCGGAACTTTACAGTCCAGCTCGACGATGTCTAACTCTGTGCCATCCAGCTTCATCAGCGAAGACCGTGGGGGTCAATGA 2190 49.54 MVVSSCGNQRPAVMVFVFLFVLISMATGGSSASLTEYLHNVGFDEGNDRWKFGFPGDSSIDGGALQLTPDTENQDFSFKNKSGRIMYNQPFKLWSSEVGVNGDDVVASFKTFFVINIYRQASWNAGEGFAFLIAPDSDSIPVGSFGQWLGLTNSTIDGKASNHIVAVEFDTEKQDFDIDDNHIGLNINSIRSNKSVSLTGMGIEISPAVAMNYSVWIQYNGSSKVMEVYMAKQKDPQPENPILRETINLKTVVNQESYFGFAGSTGDLAVQLNCVLEWRLDVEDLRKKDQKWLKITAAIVVPLFVALLIMGVYFGQKYRKRRKKRIDEESSVLGTLKSLPGIPREFQLKEMKKATRNFHPSLELGRGGFGVVYKGILAGNGEEARTEIAVKQFSGDSMVGKDDFLAELTIIHRLRHKHLVRLVADSRFDLVRPFLRVVINDDEYEFWPGYFREIISFFGPGWCYERRKLLLVYDFMPNGSLEKHLYCSDDQKVLSWGRRCKILEGVASALHYLHNEFDQKVLHRDLKSSNILLDSEFNARLGDFGLARALDPERNSYADIRLAGVPGTVGYVAPECFHTGRATPDSDVFGFGAVVLEIVCGRNPGASVQSGEHFYNLIEWVWLFHRDEQIEKAVDKRLQNDVVVEEAKKLLLLGLACSHPIAGERPSTQAIVQIVSGTSPAPYVPPFRPVFTWPSMDTTGGTTTGTLQSSSTMSNSVPSSFISEDRGGQ 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 25002960 25005479 - BLOR05739 Blo13g00458 68853

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00458 729 PANTHER - 461 715 - -
Blo13g00458 729 PANTHER - 14 423 - -
Blo13g00458 729 Gene3D Transferase(Phosphotransferase) domain 1 476 681 - -
Blo13g00458 729 Pfam Protein kinase domain 362 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00458 729 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 283 IPR013320 -
Blo13g00458 729 Gene3D - 41 297 - -
Blo13g00458 729 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 461 715 - -
Blo13g00458 729 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 14 423 - -
Blo13g00458 729 Gene3D Phosphorylase Kinase; domain 1 343 430 - -
Blo13g00458 729 Coils Coil 729 729 - -
Blo13g00458 729 ProSiteProfiles Protein kinase domain profile. 358 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00458 729 SMART serkin_6 358 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00458 729 MobiDBLite consensus disorder prediction 698 729 - -
Blo13g00458 729 MobiDBLite consensus disorder prediction 698 723 - -
Blo13g00458 729 ProSitePatterns Protein kinases ATP-binding region signature. 364 391 IPR017441 GO:0005524
Blo13g00458 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Blo13g00458 729 Pfam Legume lectin domain 43 288 IPR001220 GO:0030246
Blo13g00458 729 CDD lectin_legume_LecRK_Arcelin_ConA 56 280 IPR001220 GO:0030246
Blo13g00458 729 ProSitePatterns Legume lectins beta-chain signature. 165 171 IPR019825 -
Blo13g00458 729 SUPERFAMILY Protein kinase-like (PK-like) 345 712 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00458 - - - cpep:111792914 806.208
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00458 Blo-Chr13:25002960 Blo07g00871 Blo-Chr7:27303297 3.23E-116 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g321 . . . . . . . . Cmo19g00842 Cmo11g01827 . . . . . Cpe04g00668 Cpe15g00663 Bhi05g01535 . . . . . . Cla02g00321 . . . . . . Cone12ag1284 Cone8ag1348 . . . Csa07g00223 . . . Blo13g00458 . . Bpe15g00769 . Bma03g00652 Bma08g00704 . . . Cma11g01293 Cma19g00825 Car11g01453 Car19g00640 . . . . . . . . . . . . . . . . Lsi11g01317 . Chy01g00557 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006270 1 1 1 3 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84626 PF00069 Pkinase 2.80E-36 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00458 Blo_Chr13 FPKM 9.863636 10.456192 13.531564 11.93199 7.561603 7.888375 6.734234 1.148157 2.030234 1.534202