Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00459 ATGTCAGGTTCTCGTTTTTCTCACCATCTTCTCGGATCAGAACTCCAATTACAAAGATCATCTCAACCCGGGCATCTTTCAGATTGCAAGGACGACTCACCGGAAAAAGACGACGGGAAAAAGGGCATGGGAGATGCAGGGATGAGCAGTTCTTCATCAGGTCGGAGGCCTCGTGGTCGACCTGCAGGCTCCAAAAACAAACCTAAACCGCCGATATTTATTACTCGAGACAGCCCAAATGCTCTCAGATCCCACATTTTGGAAGTAGCTTCAGGCTCCGACATCGTCCAATCGGTTACAAACTACGCCCAGAAGCGCGGTCGGGGAGTCTGCGTTCTCAGCGGGTCCGGCGGCGTCACAAACGTAATCCTCCGGCAGCCATCATCCCCATCAGGTGGTGTAATTACACTTCACGGCAGGTATGAGATATTATCACTCAGCGGCACGGCATTGCCTCCTCCAGCGCCGCCTGGGGCTGGCGGCTTGACGGTGTACTTGGCCGGAGGGCAAGGTCAGGTGGTCGGAGGAATCGTCGTGGGACCACTAGTTGCTTGCGGCTCAGTGGTTCTGATGGCTGCTTCGTTTGCGAATGCAGTTTACGATCGGTTGCCAATGGAGGACGAGGATCCAGCCATTCAGATTCCTCCAGCATCTGAAACTTCTGGGGTGACAAGCGGTGGAGCGCAAGTAGCGGGCGACGGGGGAAGTGGAAGCAGTGGAGGAGGAGGCGTTCCCTTCCACAATCTAGGAGTGAACGTGGGAAATTATGGCTATCCTGGTGATCATATTTTAGGGTGGAGTGGCTCTGTATCTGCATCAACATCGAGACCTCCATTTTAG 840 53.93 MSGSRFSHHLLGSELQLQRSSQPGHLSDCKDDSPEKDDGKKGMGDAGMSSSSSGRRPRGRPAGSKNKPKPPIFITRDSPNALRSHILEVASGSDIVQSVTNYAQKRGRGVCVLSGSGGVTNVILRQPSSPSGGVITLHGRYEILSLSGTALPPPAPPGAGGLTVYLAGGQGQVVGGIVVGPLVACGSVVLMAASFANAVYDRLPMEDEDPAIQIPPASETSGVTSGGAQVAGDGGSGSSGGGGVPFHNLGVNVGNYGYPGDHILGWSGSVSASTSRPPF 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 25073801 25074640 - BLOR05740 Blo13g00459 68854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00459 279 MobiDBLite consensus disorder prediction 25 43 - -
Blo13g00459 279 MobiDBLite consensus disorder prediction 1 24 - -
Blo13g00459 279 Gene3D - 82 214 - -
Blo13g00459 279 MobiDBLite consensus disorder prediction 209 241 - -
Blo13g00459 279 MobiDBLite consensus disorder prediction 1 78 - -
Blo13g00459 279 PIRSF ESCAROLA 2 279 IPR014476 GO:0003680
Blo13g00459 279 ProSiteProfiles PPC domain profile profile. 79 217 IPR005175 -
Blo13g00459 279 CDD DUF296 83 149 IPR005175 -
Blo13g00459 279 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Blo13g00459 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 25 3 270 - -
Blo13g00459 279 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 270 IPR014476 GO:0003680
Blo13g00459 279 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00459 Blo-Chr13:25073801 Blo03g00383 Blo-Chr3:9086916 4.36E-67 dispersed
Blo13g00459 Blo-Chr13:25073801 Blo16g00638 Blo-Chr16:25541665 1.44E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00459 - - tcc:18608390 326.635