Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00485 ATGGCTTGGCTTCTCTGCTCTCTCTTCTTTTTATTTTCGTCCGTAACTGCTTGCGATCGCTGTGTTCATCAATCCAGAGCTGCTTATTTCTCCAAGGCTTCAGCTCTTTCGGTTGGGGCTTGTGGATATGGCTCGTTAGCATTGGGCTTTAACAGTGGACACCTTGCCGCTGGTGTGCCTACCCTGTACAAAGAAGGAGCTGGTTGTGGTGCTTGCTTTCAGATAAGATGCAAGAACACCAATCTTTGCTCAACATCAGGGAGTAAAGTGATTTTGACCGATCTCAATACAGATAACCAAACAGATTTTGTTCTTAGTAGCAGAGCTTTTGCTGCAATGGCTCGAAAGGGTCTGGAAAAGGACATTTTGAAGCGTGGAGTTGTTGACATCGAATACAAGAGAGTACCATGCGAGTATAAAAATCAAAACTTGGCCGTGCAAGTGGAAGAATCAAGCAAAAAACCACATTATCTAGCGATCAAATTCCTAAACCAAGGCGGCCAAACAGAAATAGTCGGCGTTGATGTAGCTCGGGTGGGTTCGTCAAATTGGAGCTTCTTGAGTAGAAACCACGGCGCAGTGTGGGATACAAGTAGAGTGCCAGACGGAGCCCTGCAATTTCGAATGGTGGTGACTTCTGGGTATGATGGAAAATGGATTTGGGCGAAGAGTGTTCTTCCAGCAGACTGGAAATCAGGCGTCACTTATGATTCTGGAGTTCAAATTGATGACATTGCACAAGAGGGTTGCTTTCCTTGCGACGAAGGAAATTGGAAATAA 780 45.38 MAWLLCSLFFLFSSVTACDRCVHQSRAAYFSKASALSVGACGYGSLALGFNSGHLAAGVPTLYKEGAGCGACFQIRCKNTNLCSTSGSKVILTDLNTDNQTDFVLSSRAFAAMARKGLEKDILKRGVVDIEYKRVPCEYKNQNLAVQVEESSKKPHYLAIKFLNQGGQTEIVGVDVARVGSSNWSFLSRNHGAVWDTSRVPDGALQFRMVVTSGYDGKWIWAKSVLPADWKSGVTYDSGVQIDDIAQEGCFPCDEGNWK 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 25810114 25811739 - BLOR05766 Blo13g00485 68880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00485 259 Gene3D - 12 138 IPR036908 -
Blo13g00485 259 PANTHER EXPANSIN-B3 6 255 - -
Blo13g00485 259 Gene3D - 139 242 IPR036749 -
Blo13g00485 259 SUPERFAMILY Barwin-like endoglucanases 7 141 IPR036908 -
Blo13g00485 259 SUPERFAMILY PHL pollen allergen 143 238 IPR036749 -
Blo13g00485 259 Pfam Lytic transglycolase 56 132 IPR009009 -
Blo13g00485 259 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 238 IPR007117 -
Blo13g00485 259 PANTHER EXPANSIN-LIKE A1-RELATED 6 255 - -
Blo13g00485 259 Pfam Expansin C-terminal domain 145 227 IPR007117 -
Blo13g00485 259 PRINTS Expansin/Lol pI family signature 224 238 IPR007118 GO:0005576
Blo13g00485 259 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Blo13g00485 259 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Blo13g00485 259 PRINTS Expansin/Lol pI family signature 184 198 IPR007118 GO:0005576
Blo13g00485 259 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Blo13g00485 259 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00485 Blo-Chr13:25810114 Blo19g00238 Blo-Chr19:12243645 1.58E-40 dispersed
Blo13g00485 Blo-Chr13:25810114 Blo04g00598 Blo-Chr4:5134562 4.36E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00485 - - tcc:18607447 429.869