Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00492 ATGGACGACAACGAGAGCTGCGCTAGCAGAGCCCACGACGCCTCGTCTCCGGCTCAGATGCGCCTGCACAGGAGGAAGCTCGGCGTCTACAATGAGGTTCTGCGTCGTCTCAAGAACTCCGACAACCAGGAGGCTGTTCTGCCTGGTTTTGACGATGAGCTTTGGACTCACTTCAATCGCCTTCCCGCTCGGTATGCCCTTGATGTAAATGTGGAGAGGGCAGAAGATGTTCTTATGCATAAGCGACTACTGCATTCAGCTCACGATCCTGAAAATAGACCTGCAATTGAAGTCCGACTGGTTCAGGTAGCCAATTATTTACCAAATCATTTTTTTTCCGGAACGAATGATGCCTTTCCTTTTGCTTTATGGCACTTCCGTCACCTTGTCTTCTTTATCTATAACTCTACTTTCTTCATACACCCTCCTCCTGCCTTTGGTTCATCTCCTAACCTCGAAGCACTCGCACTTGAAGCTGATCAACTTCATGATCATGATGAGGAGCACTCTGTCCATGCCAGGACACAATTTTCCAGGCCGATGCATGAGATCACCTTCTCGACAGACGATAAGCCTAAACTTTTAAGTCAGTTGACTTCATTGCTTGCTGAGATTGGGCTAAACATTCAAGAAGCACATGCATTTTCAACAATAGATGGTTACTCCTTAGATGTCTTTGTTGTTGATGGTTGGCCATATGAGGAAACGGAGCAGCTCAAAACTGCGCTAGAAAAGGAAGTGTTGAAGTTTGAGAGGAAGGATTGGCCAAATCATCAATCAATTTCTCCAGTGGGCGAGGATGATAAATTTGTTATTAAATGTGAACCTGATCATGTAAGGATACCAACTGATGGGACTGATGTATGGGAAATCGATCCTAGATATTTGAGATTCGAGCATAAAGTTGCATCTGGATCCTATGGTGATTTGTACAAAGGTACATACTGCAGCCAAGAAGTGGCTATTAAAATCCTCAAACCTGAACGCCTAAATTCTGATATGCAACGAGATTTTGCTCAAGAAGTCTTTATTATGAGGAAAGTTAGGCACAAAAACGTTGTACAGTTTATAGGTGCATGTACCAAGCCTCCAAGCCTTTGCATTGTGACTGAGTTTATGTCTGGTGGAAGTGTGTATGACTACTTACATAAACAAAAAGGCGTATTTAAGCTTCCGTCCTTACTCAAGGTAGCAATTGATGTCTCCAAAGGAATGAATTACTTGCACCAAAATAATATAATCCACAGAGATTTGAAGGCTGCCAACCTTTTGATGGATGAGAATGAAGTCGTTAAGGTTGCGGATTTTGGAGTTGCTAGAGTAAAAGTACAATCAGGAGTTATGACAGCTGAAACTGGAACATACCGATGGATGGCTCCAGAGGTAATAGAACACAAACCCTATGATCATAGGGCTGATGTTTTCAGTTTTGGAATTGTATTATGGGAGTTACTGACTGCAAAGCTTCCTTATGAATACTTAACCCCTTTGCAAGCTGCTGTTGGTGTGGTTCAAAAGGGTATACGGCCGACTATTCCAAAGAATACTCATCCAAAGCTAGTTAACTTAATGGAGATGTGCTGGCAACAAGATCCCGCAGCAAGACCTGACTTTTCAGAAATCTTGTCAATATTGCTGCAATTAGCCAAGGAGGTTGGAGATGACGGAGACGAAAGGCGCAAGGAAAAACCCACCGGAGGATTTCTATCGGTTCTGAGGCGAAATCATATCTAA 1734 43.37 MDDNESCASRAHDASSPAQMRLHRRKLGVYNEVLRRLKNSDNQEAVLPGFDDELWTHFNRLPARYALDVNVERAEDVLMHKRLLHSAHDPENRPAIEVRLVQVANYLPNHFFSGTNDAFPFALWHFRHLVFFIYNSTFFIHPPPAFGSSPNLEALALEADQLHDHDEEHSVHARTQFSRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTIDGYSLDVFVVDGWPYEETEQLKTALEKEVLKFERKDWPNHQSISPVGEDDKFVIKCEPDHVRIPTDGTDVWEIDPRYLRFEHKVASGSYGDLYKGTYCSQEVAIKILKPERLNSDMQRDFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKVQSGVMTAETGTYRWMAPEVIEHKPYDHRADVFSFGIVLWELLTAKLPYEYLTPLQAAVGVVQKGIRPTIPKNTHPKLVNLMEMCWQQDPAARPDFSEILSILLQLAKEVGDDGDERRKEKPTGGFLSVLRRNHI 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 26099919 26105628 + BLOR05773 Blo13g00492 68887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00492 577 Pfam Protein tyrosine and serine/threonine kinase 296 544 IPR001245 GO:0004672|GO:0006468
Blo13g00492 577 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Blo13g00492 577 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Blo13g00492 577 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Blo13g00492 577 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Blo13g00492 577 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Blo13g00492 577 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 12 558 - -
Blo13g00492 577 Coils Coil 233 253 - -
Blo13g00492 577 CDD STKc_MAP3K-like 302 545 - -
Blo13g00492 577 MobiDBLite consensus disorder prediction 1 20 - -
Blo13g00492 577 ProSiteProfiles ACT domain profile. 183 255 IPR002912 -
Blo13g00492 577 CDD ACT_TyrKc 181 248 - -
Blo13g00492 577 SUPERFAMILY Protein kinase-like (PK-like) 282 545 IPR011009 -
Blo13g00492 577 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 558 - -
Blo13g00492 577 SMART serkin_6 296 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00492 577 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Blo13g00492 577 Gene3D Transferase(Phosphotransferase) domain 1 375 565 - -
Blo13g00492 577 SUPERFAMILY ACT-like 181 246 IPR045865 -
Blo13g00492 577 ProSiteProfiles Protein kinase domain profile. 296 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00492 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00587 Blo13g00492 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01614 Blo-Chr1:56034216 Blo13g00492 Blo-Chr13:26099919 0 dispersed
Blo13g00492 Blo-Chr13:26099919 Blo16g00098 Blo-Chr16:2364835 0 dispersed
Blo17g00274 Blo-Chr17:2885850 Blo13g00492 Blo-Chr13:26099919 2.33E-46 dispersed
Blo18g00215 Blo-Chr18:2094843 Blo13g00492 Blo-Chr13:26099919 7.94E-142 transposed
Blo13g00492 Blo-Chr13:26099919 Blo15g00394 Blo-Chr15:5505605 0 wgd
Blo13g00492 Blo-Chr13:26099919 Blo04g00587 Blo-Chr4:5061539 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84629 PF07714 PK_Tyr_Ser-Thr 9.80E-74 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00492 - - qsu:112000776 915.605