Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00496 ATGTGTAATGACCGTCGGCTAGTTTTCTACGGTCGGATGAGGTCAACCAAAAAGATTGGGCAACCGAAAGCAGAGGAACTTATAAATAGAAGGCACTCCGAGGATGGAGAGTACCGAACCGTTTCTGGGGTTGCTGGACCTTTGGTTATACTAGATAAAGTTAAGGGACCCAAATTCCAGGAAATCGTTAATATTCGCTTAGGAGATGGAACAACTCGACGTGGCCAAGTTCTTGAAGTTGATGGGGAGAAAGCTGTTGTTCAGGTTTTTGAAGGAACTTCGGGAATTGATAACAAATATACGACTGTGCAATTCACTGGAGAGGTTTTGAAAACCCCAGTCTCATTGGATATGCTGGGCCGCATATTTAATGGCTCTGGAAAACCCATTGATAATGGCCCTCCTATTTTGCCTGAGGCATACTTGGATATTTCGGGTGATTCTATTAACCCAAGTGAGAGAACATATCCGGAGGAGATGATACAGACTGGTATTTCTACCATTGATGTTATGAACTCCATCGCTAGAGGACAAAAGATTCCACTCTTTTCGGCTGCTGGTCTTCCCCATAATGAAATAGCTGCACAAATATGTCGGCAGGCTGGTTTAGTGAAACGGTTGGAGAAATCAGACACTCTTCTTGAGGACAGGGAAGAAGACAATTTTGCTATTGTTTTTGCAGCTATGGGTGTGAACATGGAAACTGCACAGTTTTTCAAACGAGATTTTGAAGAAAATGGATCAATGGAGAGAGTGACCCTTTTTCTGAATCTGGCTAATGATCCTACAATTGAGCGTATTATTACTCCTCGTATTGCTCTTACTACTGCCGAGTATTTGGCTTATGAATGTGGAAAACATGTTCTTGTCATCTTGACTGATATGAGTTCTTATGCTGATGCACTCCGTGAGGTGTCTGCTGCTCGGGAGGAAGTACCTGGAAGGCGTGGATATCCTGGTTATATGTATACTGATCTTGCCACAATATATGAGCGTGCAGGACGTATTGAAGGAAGAAAAGGCTCTATCACCCAAATTCCAATTCTAACTATGCCTAATGATGATATCACGCATCCAACACCAGATCTTACTGGATATATCACGGAGGGACAGATATACATTGACAGGCAGCTACATAACAGACAGATTTATCCACCAATCAATGTCCTGCCTTCACTATCTCGTCTCATGAAGAGTGCTATTGGTGAGGGAATGACTCGTAGGGATCATGCTGATGTATCCAATCAGCTCTATGCAAATTATGCAATTGGGAAGGATGTGCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCTCTTTCTTCTGAAGACCTGCTTTATCTGGAATTCTTGGACAAATTCGAGAGGAAGTTTGTCACACAAGGAGCCTATGACACCCGTAATATCTTCCAGTCACTCGATCTAGCGTGGACGTTGCTTAGAATTTTCCCCCGTGAGCTCCTCCACCGTATACCGGCAAAGACCCTTGATCAGTACTACAGCCGGGAAACAGCTAATTAA 1518 43.48 MCNDRRLVFYGRMRSTKKIGQPKAEELINRRHSEDGEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGDSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDTLLEDREEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRETAN 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 26200860 26206939 - BLOR05777 Blo13g00496 68891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00496 505 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 37 505 IPR022879 -
Blo13g00496 505 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 37 505 - -
Blo13g00496 505 PIRSF V-ATPsynth_beta/V-ATPase_B 29 505 IPR022879 -
Blo13g00496 505 CDD ATP-synt_V_A-type_beta_N 37 108 - -
Blo13g00496 505 Gene3D - 46 505 - -
Blo13g00496 505 Pfam ATP synthase alpha/beta family, beta-barrel domain 41 107 IPR004100 GO:0046034|GO:1902600
Blo13g00496 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 400 IPR027417 -
Blo13g00496 505 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 164 394 IPR000194 GO:0005524
Blo13g00496 505 Hamap V-type ATP synthase beta chain [atpB]. 35 503 IPR022879 -
Blo13g00496 505 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 37 504 IPR005723 GO:0033180|GO:0046961|GO:1902600
Blo13g00496 505 CDD V_A-ATPase_B 109 396 - -
Blo13g00496 505 CDD ATP-synt_V_A-type_beta_C 404 498 - -
Blo13g00496 505 ProSitePatterns ATP synthase alpha and beta subunits signature. 385 394 IPR020003 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00583 Blo13g00496 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00496 Blo-Chr13:26200860 Blo17g00662 Blo-Chr17:16454512 8.33E-45 dispersed
Blo10g00587 Blo-Chr10:17543503 Blo13g00496 Blo-Chr13:26200860 5.45E-31 transposed
Blo13g00496 Blo-Chr13:26200860 Blo04g00583 Blo-Chr4:5022477 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00496 K02147 - mus:103985524 914.064