Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00500 ATGACGAAGGACGTCTTGGAAGAGGGACGTGGAAACAAGGACTACGCCGACCCCCTACCTGCGCCGCTCATCGACCTAGGCGAGCTCAAGCAATGGTCTTTCTACAGAGCCCTCATCGCCGAGTTTATCGCCACCCTTCTCTTCCTCTACGTTACCGTAGCCACCGTCATCGGCAACAACAAGCAAGACGGCGACTGTAACGGCGTCGGCCTTCTGGGTATCGCTTGGGCCTTCGGCGGGATGATCTTCATCCTCGTCTACTGTACCGCTGGAATTTCCGGCGGTCATATCAACCCGGCAGTGACGTTCGGGCTGTTTTTGGCCAGGAAAGTGTCCCTCCTTCGAGCCGTCGCTTACATGGTGGCTCAGTGTCTGGGAGCTATCGTCGGCGTTGGGTTGGTCAAAGCCTTTATGAAGCACGACTATAACAACAATGGCGGCGGAGCTAACGTCGTTGCAGGTGGCTACACCAAAGGCACAGCTCTTGGTGCTGAAATTATCGGCACTTTCGTGCTTGTCTACACTGTTTTCTCTGCAACTGACCCAAAAAGGAGCGCTCGCGACTCTCACATCCCTGTTTTGGCCCCATTACCCATTGGGTTCGCCGTGTTTATGGTACACTTGGCAACCATTCCGATCACCGGAACTGGAATCAACCCTGCTCGGAGTTTCGGTGCAGCTGTTATCTTCAACAGCGAAAAAGCATGGGATGAGCAGTGGATCTTCTGGGTCGGGCCGTTCGTCGGAGCACTGGCGGCAGCGGCGTACCACCAGTACATTCTGAGAGCAGCAGCCATTAAAGCACTCGGATCATTCCGCAGCAACCCTACCAACTAA 837 54.96 MTKDVLEEGRGNKDYADPLPAPLIDLGELKQWSFYRALIAEFIATLLFLYVTVATVIGNNKQDGDCNGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLLRAVAYMVAQCLGAIVGVGLVKAFMKHDYNNNGGGANVVAGGYTKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSEKAWDEQWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 26328730 26329713 - BLOR05781 Blo13g00500 68895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00500 278 Pfam Major intrinsic protein 28 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 PANTHER BNAC03G65520D PROTEIN 1 277 - -
Blo13g00500 278 CDD MIP 36 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 277 IPR034294 -
Blo13g00500 278 TIGRFAM MIP: MIP family channel proteins 40 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 SUPERFAMILY Aquaporin-like 28 262 IPR023271 -
Blo13g00500 278 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 PRINTS Major intrinsic protein family signature 200 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 PRINTS Major intrinsic protein family signature 240 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00500 278 Gene3D Glycerol uptake facilitator protein. 21 278 IPR023271 -
Blo13g00500 278 ProSitePatterns MIP family signature. 96 104 IPR022357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00573 Blo13g00500 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00662 Blo-Chr2:17327538 Blo13g00500 Blo-Chr13:26328730 6.53E-159 dispersed
Blo13g00500 Blo-Chr13:26328730 Blo14g00177 Blo-Chr14:1386783 9.93E-157 dispersed
Blo13g00500 Blo-Chr13:26328730 Blo04g00573 Blo-Chr4:4927713 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00500 K09872 - tcc:18607531 499.204