Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00533 ATGGGGGCGGGTGCTCGGCAGGAACCCATGACATTGGAGAAGATGGAAGGAACAAATGCCCGAGAGGAGAAGATTCTTGTTTTAGTGAGGTTGAGGCCATTGAGTGAGAAAGAGAATATCATGCATGAAGTATCAGATTGGCAATGCATTAATGACACTGCAATCTTGTATCATAATACACTGTGCGAGGGCTCGAAGTTTCCAAATGTCTATACTTTTGATAGAGTGTTCAGAGGTGACTGTTGTACAAAACAAGTGTATGAGGAAGGAGCCAAAGAAATTGCTCTTTCTGTTGTTACTGGTATCAACTCTAGCATATTTGCTTATGGGCAAACAAGCAGTGGGAAGACATACACTATGAACGGAATTACTGAATATACGATAGCTGATATATTTGACTATATACGAAAGCATGAAGAAAGAGCGTTTGTTTTGAAGTTCTCAGCAATTGAGATTTACAATGAAGCTGTTAGAGATCTACTAAGTACTGATAATACTCCACTTAGGCTGCGTGACGATCCTGATCGAGGAACTATTGTGGAAAGAGCAGCTGAGGAAACTTTGAGGGATTGGAACCATTTGAAAGAGCTTCTCTCAATTTGTGAAGCTCAAAGACGGATTGGGGAGACCACATTAAATGAGAAAAGCTCCAGAACAATTGAAAGTTCTGCTCAAGAATTTTTAAGAAAAGATAATTCGACCACTCTTGCTGCTAGTGTGAATTTTGTTGATTTGGCTGGTAGTGAGCGTGCATCTGAGGCATTATCAGCTGGGGCAAGATTGAAAGAAGGGTGCCACATAAATCGCAGTTTACTTACTCTGGGCACTGTTATTCGCAAGCTAAGTAAGGGAAGACAGGGGCACATCAATTATAGAGATTCTAAATTGACACGCATACTGCAACCCTGCCTAGGTGGCAATGCCAGAACAGCTATTATCTGCACTTTAAGCCCTGCTAGAAGACATGTTGAACAAACCAGAAATACTCTTCTATTTGCATGTTGCGCAAAAGAAGTGACTACTAGAGCACAAGTCAATGTAGTTATGTCTGCTAAGGCATTGATTAAGCATTTGCAGGGAGAACATGCTAGACTGGAGTGTGAGTTGAAAAGTCCTGTCCCTATACAATCACATTGTGACCATACAGCCTTGCTTAGAAAGAAAGATCTGCAGATTGAAAAGATGGAAAAGGAGATTAGAAAGCTTACTAAGCAACGGGATCTTGCTCAGTCTCGGGTGGAGGATTTACTTCGAATGGTTAGATGTGATCAAGACTCAAGTCATATCAGGAATAATAGTAATCAAGAATGGCTTATGGGGGATGCATGGAAAGATGAATGCTCGGCATCAGAGTCATCAGGCATGGCTGAGATTCATTGTCTAAATGTTAGTGCCATAAGGTTTAACAATCCTCATTACCTTGATGGAAACGTGGAAAGACAGCTAGATAGAAAAGTAAAAGTAGTAAGATCGGATAGAGGTGGTGAATACCATGGGAAATTCGATGAAAGTGGACAAAACAAAGGTCCATTTGCTAGGTTTCTCGAAAGTCGAGGCATTTGTGCGCAATACACAATGTCGGGTACACCACAACAAAATGGTGTAGCTGAAAGGCGGAATCGTACTCTTATCGAAATGGTAAGAAGTATGATTAATAATAATTCTGATTACGCCGGTTGTGTAGACTCGAGGAAATCTACATTTGGCTACGTGTTCCTGTTAGCTGAAGGAGCCGTATCATGGAAAAGTGGAAAGCAATCTACGATTGCCATTTCCACTATGGAAGCTGAATTTGTAGCTTGTTTTGAAGCTACAATTCAAGCATTATCTGATTCTGATGACTGCAAGGAAGTGTTATGTATTGAAACAGAGGAACCAATCAGGGACAACAGCACTGAATCTCTTGCTTTATCAACAAGTGAAAATGGAGTAGCAATGACTTCGACCGAGGCTGATAATGACAATATAATGAGTCAGCAAATTATTCTAACTCCTGCAGTTGATTTCAGAGACGGGAGTCAGAATCAAAATGGTTTGTCAAATGGTGCATTAGAGCATTATCCAAAAGAATCATTTCCTCTGGAAGAAGCAGGGCATTTATCAAGTTCTGGAAGCCATAAACGAAACAGAAGCTGGAGCTGTAACGCTGATCTCGTGTCTGGTTCATCTTCCCCAGAAAGAGCAGAAAGCACACCACCTTGTAGCTTTGAGAAAAGCTTTCCTGGAAGGCCAGCAGGTTTTGGAAGGAAGATTACTCCGTCAACTTTTGGTCTTGGTTTTTCAAGATTTGACTTCAAATCTTCTGTGGCAAGTGGTCAGAGAGAAAAATGTGCAGCGAATGAGGACATTACTAGCTTAGATACTTCTGATGCTGGACTGAATGAAATGACTAAACTTGATTTTAAGCAGCAACTTATGGATGTTATGAAAAGTGAATATGCATTTTATTCTTTAATAATATCATATCTAACATCTTGTGCTTTATACTGTTGTTGTCGCTTGTTGATGCAGAGGGTGGAGGTAGAACTAGAAAGTGGTAAATTATTAAAGAATGGGGAAGCATATGGAATTGATTTGATGCAGAAAGAATTGGAAACACATTCCATCTATCTGGAGGCAGAGATAAGAAGATTGACTTTTCTGAAAGAAAAATTTTTGCATGGAAATTGGATTGTGGAAGATGGTCATGGCCAGGGTCAGACTCTGACTGCAAGGGACAGCACTAAGGCTCTTTGTCGTGAGAGGGAAATGCTGAATAAGCTGGTGAAAAAAAGGTTCTCAGAAGAAGAGAGAAAGAGACTTTTCCAGAAGTGGGGTATTGCATTGAACTCAAAACGCAGGAGACTACAGCTAGCCAACTGCCTGTGGAGCAACTCTAAAGATGTGAACCACATCACTGAGAGTGCTTCCACTGTTGCAAAGCTTGTTAGATTTGGTGAGCAGGGACAGGCTCTCAAGGGAATGTTTGGCCTTAGCTTCCCACCTCCACGCATAAAGTGGAGAGCTTGGCATCTTTTCTATGACCTTCTTTAG 3033 41.05 MGAGARQEPMTLEKMEGTNAREEKILVLVRLRPLSEKENIMHEVSDWQCINDTAILYHNTLCEGSKFPNVYTFDRVFRGDCCTKQVYEEGAKEIALSVVTGINSSIFAYGQTSSGKTYTMNGITEYTIADIFDYIRKHEERAFVLKFSAIEIYNEAVRDLLSTDNTPLRLRDDPDRGTIVERAAEETLRDWNHLKELLSICEAQRRIGETTLNEKSSRTIESSAQEFLRKDNSTTLAASVNFVDLAGSERASEALSAGARLKEGCHINRSLLTLGTVIRKLSKGRQGHINYRDSKLTRILQPCLGGNARTAIICTLSPARRHVEQTRNTLLFACCAKEVTTRAQVNVVMSAKALIKHLQGEHARLECELKSPVPIQSHCDHTALLRKKDLQIEKMEKEIRKLTKQRDLAQSRVEDLLRMVRCDQDSSHIRNNSNQEWLMGDAWKDECSASESSGMAEIHCLNVSAIRFNNPHYLDGNVERQLDRKVKVVRSDRGGEYHGKFDESGQNKGPFARFLESRGICAQYTMSGTPQQNGVAERRNRTLIEMVRSMINNNSDYAGCVDSRKSTFGYVFLLAEGAVSWKSGKQSTIAISTMEAEFVACFEATIQALSDSDDCKEVLCIETEEPIRDNSTESLALSTSENGVAMTSTEADNDNIMSQQIILTPAVDFRDGSQNQNGLSNGALEHYPKESFPLEEAGHLSSSGSHKRNRSWSCNADLVSGSSSPERAESTPPCSFEKSFPGRPAGFGRKITPSTFGLGFSRFDFKSSVASGQREKCAANEDITSLDTSDAGLNEMTKLDFKQQLMDVMKSEYAFYSLIISYLTSCALYCCCRLLMQRVEVELESGKLLKNGEAYGIDLMQKELETHSIYLEAEIRRLTFLKEKFLHGNWIVEDGHGQGQTLTARDSTKALCREREMLNKLVKKRFSEEERKRLFQKWGIALNSKRRRLQLANCLWSNSKDVNHITESASTVAKLVRFGEQGQALKGMFGLSFPPPRIKWRAWHLFYDLL 1010
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 27105998 27118751 - BLOR05814 Blo13g00533 68928

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00533 1010 SMART kinesin_4 22 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo13g00533 1010 MobiDBLite consensus disorder prediction 716 730 - -
Blo13g00533 1010 PANTHER KINESIN-LIKE PROTEIN KIN-7F 7 1004 - -
Blo13g00533 1010 Coils Coil 385 419 - -
Blo13g00533 1010 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo13g00533 1010 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo13g00533 1010 PRINTS Kinesin heavy chain signature 239 257 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo13g00533 1010 PRINTS Kinesin heavy chain signature 289 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo13g00533 1010 ProSiteProfiles Kinesin motor domain profile. 24 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo13g00533 1010 ProSiteProfiles Integrase catalytic domain profile. 487 550 IPR001584 GO:0015074
Blo13g00533 1010 Pfam Domain of unknown function (DUF3490) 865 995 IPR021881 -
Blo13g00533 1010 Pfam Kinesin motor domain 30 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo13g00533 1010 SUPERFAMILY Ribonuclease H-like 478 555 IPR012337 -
Blo13g00533 1010 MobiDBLite consensus disorder prediction 716 736 - -
Blo13g00533 1010 CDD KISc_CENP_E 24 339 - -
Blo13g00533 1010 ProSitePatterns Kinesin motor domain signature. 238 249 IPR019821 GO:0003777|GO:0005524|GO:0007018
Blo13g00533 1010 CDD RNase_HI_RT_Ty1 555 609 - -
Blo13g00533 1010 Gene3D - 466 570 IPR036397 GO:0003676
Blo13g00533 1010 PANTHER CENTROMERE PROTEIN E 7 1004 - -
Blo13g00533 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 370 IPR027417 -
Blo13g00533 1010 Coils Coil 348 368 - -
Blo13g00533 1010 Gene3D Kinesin motor domain 15 369 IPR036961 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00533 K11498 CENPE; centromeric protein E - zju:107426777 861.677
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00649 Blo13g00533 CCT
Blo02g00649 Blo13g00533 ECH
Blo04g00541 Blo13g00533 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00649 Blo-Chr2:15695885 Blo13g00533 Blo-Chr13:27105998 0 dispersed
Blo13g00533 Blo-Chr13:27105998 Blo16g00862 Blo-Chr16:36156137 1.86E-18 dispersed
Blo13g00533 Blo-Chr13:27105998 Blo18g00788 Blo-Chr18:22760359 1.69E-28 wgd
Blo13g00533 Blo-Chr13:27105998 Blo04g00541 Blo-Chr4:4650155 4.75E-140 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g46 Blo02g00649 . . Bda08g00962 . Bpe12g00095 . . Cmo19g00704 . . . . . . Cpe04g00100 Cpe15g00563 Bhi05g01255 . . . . . . Cla02g00484 Cam02g0492 Cec02g0493 Cco02g0498 Clacu02g0496 Cmu02g0491 Cre02g0824 Cone12ag1189 Cone8ag1236 . Cone10ag1095 . Csa07g00039 . Cme01g01338 Blo04g00541 Blo13g00533 Bda15g01063 Bda14g00581 Bpe15g00840 Bpe05g00313 Bma03g00574 . . . . . Cma19g00692 . Car19g00536 . . . . . . . . . . . . . . . . Lsi11g01139 . Chy01g00742 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004297 2 1 3 1 3 1 2 1 1 1 1 1 3 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00533 Blo_Chr13 FPKM 0.238297 0.0 31.349512 31.460581 0.0 0.0 0.0 0.245272 0.504134 0.733058