Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00540 ATGACCAGGGATCGTCGTCCGCCATCTCCTCTAGAAGACGCCGATGCAATCCTGCCCATCGATCCAGATAAGGGATGTCCCTCGCTTGATCCAACGGCTAGGAATCGTCGTCCGTCCGTCGCTTATGGAAGACGCCAGATACAATCCTCGGCGTCGATCCAGATGAGGGACGTCCCTCGCTCGATCCAATGGCCAAGGATTGTCGTTCGAGGGACGGTACTTGATGTCATTCGTCTCCATTTGACGGTATTTGACAGAGACGAAACCGAGGCGTTACACTCGACAATTCTGGACAGGAAACGTGACTGCGAGCTCAATTCAGAGAAGAGTCCATTTCAGCGAACTTATGCTGCTCAGATTAAGAAGTGTGGAGAGATGGCACGCAAATTGCGTTTTTTCAAGGAGCAAATGTTGAAGTCTGGAGTGGTTTCAAATGGGTTCATAACAAAAACTGAAATAAATGTGGATGATCTAGAGGTCAAACTCGGTGAACTTGAGGCTGAATTGGTTGAAATAAATGCAAATGGGGAGAAGTTACACCGTTCATATGGTGAACTTGTAGAATATAAACTTGTTCTGCAGAAGGCTGGTGAATTTTTCCACTCAGCTCAAAGCACTGCCTTAGAACAGCACAGAGAATATGAATCACGTCAACTGGGTGAAGAATCCTTAGACACGCCACTATTGTTGGAGCAAGATATCTCAGCGGATGCATCAAAGCAAATTAAGTTAGGGTTCCTTGCTGGACTTGTTGCTAGGGAAAAATCTATGACGTTCGAGAGGATTCTGTTTCGTGCTACAAGGGGAAATGTATTTCTAAAGCAGGCAGCTGTTGAGCATCCTGTTACAGATCCTGTATCTGGAGACAAGATTGAGAAAAATGTCTTCGTGATTTTCTACTCTGGAGAAAGAGCAAAGAACAAAATTCTTAAAATATGTGAGGCATTTGGAGCAAATCGATACCCTTTTACTGAAGACCTGGACAAACAGGCCCAGATGATCGCAGAGGTTTCAGGAAGGCTCTCTGAACTGAAAACTACTATAGATGTGGGACTTCTGCATCAAGGAAATTTGTTGCAGACCATCGGAGATCAAATTGAGCAATGGGACATTTTGGTGAGAAAGGAGAAGTCTATATACCACACATTGAACATGCTCAGCCTTGATGTGACAAAAAAGTGTCTAGTGGCTGAGGGATGGGCTCCAGTTTTTGCAACAAAACAGATTCAGGATGCATTGCAACGAGCAGCATTTGATTCCAATTCCCAAGTTGGGGCCATTTTCCAAGTTCTGCAAACAACAGAATCTCCACCTACCTATTTCCGGACAAATAAATTCACTTCTGCATTCCAAGGAATTGTTGATGCATATGGCGTGGCTAAGTATCAAGAAGCCAATCCTGGTGTATACACTGTTGTCACCTTCCCATTTCTTTTTGCTGTCATGTTTGGCGACTGGGGGCATGGAATATGTTTGTTACTTGCAACACTGTACTTCATTGTCAGGGAAAGGAAACTTTCTAATCAGAAGCTTGGTGACATCATGGAAATGACGTTTGGAGGGCGCTATGTTATTATGATGATGGCGCTTTTCTCAATATATACAGGCCTCATATATAATGAGTTCTTCTCTGTCCCATTTGAACTTTTTGGTCGCTCAGCTTATGCTTGTCGTGAACTTGACTGCAGAGACGCTACAACAATCGGGTTGATTAAGGTTGGCCCCACCTACCCATTTGGTGTGGACCCTGTATGGCATGGAACTCGAAGTGAGCTGCCATTCCTCAATTCTTTGAAAATGAAAATGTCAATCCTTATTGGAGTTGCCCAAATGAACCTTGGAATCATAATAAGCTATTTCAATGCAAAATTTTTTAGAAACAGTCTCAATATCTGGTATCAATTTTTGCCGCAGATGATATTTTTAAACTCTCTTTTTGGATATCTATCTCTCCTCATAATCATAAAATGGTCCACTGGTTCTCAAGCGGATTTGTACCATGTAATGATCTATATGTTCCTAAGTCCCACTGATGATCTTGGTGAAAACCAGCTTTTTGTCGGACAGAAATCTGTTCAGATTGTGCTTCTCTTACTGGCACTTGTTTCTGTACCGTGGATGCTGCTTCCAAAACCTCTTATATTGAAGAAGCAACATCAGGAGAGGCACCGTGGTGAATCTTATGAGCCATTACAAAGCACAGAAGACACACTTCAATTGGAATCAAACCATGATTCTCATGGTCATGAGGAATTTGAGTTCAGTGAAGTTTTTGTGCATCAGCTTATACATACAATAGAATTTGTACTTGGAGCAGTGTCGAATACAGCTTCCTACCTTCGTCTTTGGGCCCTAAGTCTCGCCCACTCAGAACTATCAAGCGTATTCTATGAGAAGGTTCTTGTTCTAGCTTGGGGGTTCAACAACGTAATCATCCTTGCAGTAGGCATCATCGTCTTTGTATGCGCCACTGTCGGTGTGTTACTGGTTATGGAAACCCTCAGCGCTTTCCTACACGCATTGCGTCTTCATTGGGTGGAATTCCAAAACAAATTTTATGAGGGCGATGGCTACACGTTCTACCCATTTTCATTTGCTTTGATAGGCGATGAAGCCGAATGA 2622 43.17 MTRDRRPPSPLEDADAILPIDPDKGCPSLDPTARNRRPSVAYGRRQIQSSASIQMRDVPRSIQWPRIVVRGTVLDVIRLHLTVFDRDETEALHSTILDRKRDCELNSEKSPFQRTYAAQIKKCGEMARKLRFFKEQMLKSGVVSNGFITKTEINVDDLEVKLGELEAELVEINANGEKLHRSYGELVEYKLVLQKAGEFFHSAQSTALEQHREYESRQLGEESLDTPLLLEQDISADASKQIKLGFLAGLVAREKSMTFERILFRATRGNVFLKQAAVEHPVTDPVSGDKIEKNVFVIFYSGERAKNKILKICEAFGANRYPFTEDLDKQAQMIAEVSGRLSELKTTIDVGLLHQGNLLQTIGDQIEQWDILVRKEKSIYHTLNMLSLDVTKKCLVAEGWAPVFATKQIQDALQRAAFDSNSQVGAIFQVLQTTESPPTYFRTNKFTSAFQGIVDAYGVAKYQEANPGVYTVVTFPFLFAVMFGDWGHGICLLLATLYFIVRERKLSNQKLGDIMEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGRSAYACRELDCRDATTIGLIKVGPTYPFGVDPVWHGTRSELPFLNSLKMKMSILIGVAQMNLGIIISYFNAKFFRNSLNIWYQFLPQMIFLNSLFGYLSLLIIIKWSTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKSVQIVLLLLALVSVPWMLLPKPLILKKQHQERHRGESYEPLQSTEDTLQLESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLVLAWGFNNVIILAVGIIVFVCATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYTFYPFSFALIGDEAE 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 27258802 27269488 + BLOR05821 Blo13g00540 68935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00540 873 MobiDBLite consensus disorder prediction 1 48 - -
Blo13g00540 873 Pfam V-type ATPase 116kDa subunit family 104 865 IPR002490 GO:0033179|GO:0046961|GO:1902600
Blo13g00540 873 Coils Coil 148 175 - -
Blo13g00540 873 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 104 872 - -
Blo13g00540 873 PANTHER VACUOLAR PROTON ATPASES 104 872 IPR002490 GO:0033179|GO:0046961|GO:1902600
Blo13g00540 873 PIRSF ATP6V0A1 98 873 IPR026028 GO:0000220|GO:0046961
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00529 Blo13g00540 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00540 Blo-Chr13:27258802 Blo14g00151 Blo-Chr14:1160187 0 dispersed
Blo18g00571 Blo-Chr18:8120300 Blo13g00540 Blo-Chr13:27258802 1.16E-20 transposed
Blo13g00540 Blo-Chr13:27258802 Blo17g00765 Blo-Chr17:24366795 0 wgd
Blo13g00540 Blo-Chr13:27258802 Blo04g00529 Blo-Chr4:4553860 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00540 K02154 - qsu:112027035 1308.89