Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00543 ATGAAGAATCCAAGATTTCTATCTTCGCCGCCAATGGCTATCCTCCTGGTTCTACTTTCCGGCCTCCTTTGTGGCCGTATCTCAGCCCTTTCCACCGGCTTCGTTCCGGTGGATAATTTCCTCATTGATTGTGGTGCAGAGACCTTAGCCACCCTGCCGGACGGAAGGATTTTCAAGACAGATGAGCAATCCAGGCAGTTTCTAAATGCCAACGACGATATCAAAGCCTCCGCCCCTTCCGATAATCTGCCTTCGTCTTTATACGCAACGGCGAGGATCTTTTTCCAACAAGCCACTTACGCCTTTCAGTTGGCGGAGCCTGGATGGCATTGGATCCGCCTCCATTTTTACCCCGTTAAGAGCGCCAGTTTCGATTTGGTTCAGGCCAAGTTTACCGTCACCACCGATAAGTACGTTTTGCTGCACAGCTTCAACATAAAAAACGCCACCCAATACGTTCTCAAGGAGTTCCTTATCAACGTCACGGATCCAAAACTCTCGATCAAATTCTCTCCGATGAAGAACTCCGCCGCTTTCATCAACGCCGTCGAGGTGGTTTCGGCTCCCGACGGCTTGATCGAGGACACCAGTGCAGTCCTTTCCCCGGTTGGTCAATATCACGGCCTATCCAGCCATGCTTTCCAGACCCTTTACAGGATCAATATGGGAGGTCCGCTAATCACCTCCAGAAACGACTCTCTCGGACGGATATGGCTGCCGGACGAACCTTATATTAAGGCCAAAAATTTCGGACGAAGTGTCACTGTTCAGACCAGTACCATCAAGTATCAGGAAGGACAGGAACAGCTAGGGGCGTTGATTGCACCTCAAAGTGTCTATGCAAGTGCAATTCGAATGGCAGATGCCACTGTAAATCAACCAAACTTCAACGTCACGTGGAATTTCGAGGCCGATCCTTCATTCGCATATCTAGTTCGGCTCCATTTTTGCGACGTTGTGAGCAAAGTACTAAACGATCTCTACTTCGACGTTTATATCAACGGGAATGCAGCAATTACAGACTTGGATTTGTCGCACACGTTGGGAGGCCTGTCGATCGCATACTACGCGGACATTCTGGTCAATGCTTCGTCGATTTCCAATGGCGTTCTCACAGTTCAGATCGGACCGTCCAAGCTCAGCACCGGCGACGTCAATGCCATTTTGAACGGTCTTGAAGTCTTGAAAATGAGTAACTCGGTGGATAGTTTAGATGGAGAGTTTGGCGTTGATGGGAAATCTGCCGACGGTTCCAACCGTGGGACAGTGGCGGCTGTTGGGTTTGCGATGATGTTCGGAGCCTTCGTCGGACTTGGAGCTATGGTGATCAAATGGCACAAGCGGCCACAAGATTGGCAGAAGAGAAACAGCTTTTCTTCATGGCTGCTTCCCGTCCATGCAGGCGATACAAGCTTTATGACGAGCAAAACCTCGTACGGATCGCACAAAACCAATATTTACTCGTCGACTCTAGGACTCGGAAGGTTCTTTTCTTTTGCAGAGTTGCAGGAAGCGACCAAGAACTTCGACTCCAACGCAATCATCGGCGTTGGAGGATTCGGCAACGTCTATCTGGGATTGATCGACGAGGGGACTAAAGTTGCAGTCAAACGAGGAAATCCTCAGTCGGAGCAAGGAATTACCGAATTCGAGACAGAAATTCAGATGCTCTCGAAGCTTAGACATCGGCATTTGGTTTCTCTGATCGGCTACTGCGACGAGAACTCAGAAATGATCTTAGTTTATGAGTATATGTCTAATGGACCTTTCAGAGACCATTTGTACGGAAAGGACTTGCCCCCACTTTCATGGAAGCAGAGGCTGGAAATCTGCATCGGGGCGGCGCGTGGGCTCCACTACCTTCACACCGGCACTGCACAAGGCATCATTCACAGGGACGTAAAGACGACGAACATTTTGCTCGACGATAACTTCACCGCCAAGGTCGCTGATTTTGGGCTGTCGAAGGATACACCGATGGGGCAAGGCCACGTTAGCACAGCCGTGAAAGGAAGCTTTGGATACTTGGATCCGGAGTATTTCCGGAGGCAGCAGTTGACGGACAAATCAGATGTTTACTCATTTGGGGTGGTTCTGCTCGAGGTTCTTTGTGTCCGTCCGGCGATTAACCCGTCTCTGCCGAGGGAACAAGTGAATCTGGCTGATTGGGCTATGCAGTGGAAGAGGAAGAATCTGTTGGATAAGATAATGGATCCTTTTCTTGTCGGCACTATCAATCCTGAATCCATGAAGAAGTTTGCAGAGGCTGCAGAGAAGTGTTTGGCTGAATATGGAGTTGACAGACCCACCATGGGAGACGTGCTGTGGAATTTGGAGTACGCTTTGCAGCTTCAAGAGGCTTTCACGCAGGGCCAAACGGAGGACGAGAGCAAGTCCTCTGCAACAATATCAGTTCCCGGCAGTGATTCTACAGTCGAGAATCCTGCCGTTTCTTCTACACCTGAAGAGAACAAGGCTTCTTCTTCTACACCAGAAGAGAACAAGGCTTCTTCTTCTTCTTCTGAGGTTCAGGCCATTAATGAACACTCTGGAACTGCAATGTTTGCGCAGTTTGCTAATCTCAGCGGTCGGTAA 2595 49.52 MKNPRFLSSPPMAILLVLLSGLLCGRISALSTGFVPVDNFLIDCGAETLATLPDGRIFKTDEQSRQFLNANDDIKASAPSDNLPSSLYATARIFFQQATYAFQLAEPGWHWIRLHFYPVKSASFDLVQAKFTVTTDKYVLLHSFNIKNATQYVLKEFLINVTDPKLSIKFSPMKNSAAFINAVEVVSAPDGLIEDTSAVLSPVGQYHGLSSHAFQTLYRINMGGPLITSRNDSLGRIWLPDEPYIKAKNFGRSVTVQTSTIKYQEGQEQLGALIAPQSVYASAIRMADATVNQPNFNVTWNFEADPSFAYLVRLHFCDVVSKVLNDLYFDVYINGNAAITDLDLSHTLGGLSIAYYADILVNASSISNGVLTVQIGPSKLSTGDVNAILNGLEVLKMSNSVDSLDGEFGVDGKSADGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPVHAGDTSFMTSKTSYGSHKTNIYSSTLGLGRFFSFAELQEATKNFDSNAIIGVGGFGNVYLGLIDEGTKVAVKRGNPQSEQGITEFETEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMSNGPFRDHLYGKDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDDNFTAKVADFGLSKDTPMGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEVLCVRPAINPSLPREQVNLADWAMQWKRKNLLDKIMDPFLVGTINPESMKKFAEAAEKCLAEYGVDRPTMGDVLWNLEYALQLQEAFTQGQTEDESKSSATISVPGSDSTVENPAVSSTPEENKASSSTPEENKASSSSSEVQAINEHSGTAMFAQFANLSGR 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 27301208 27303802 - BLOR05824 Blo13g00543 68938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00543 864 CDD STKc_IRAK 515 779 - -
Blo13g00543 864 PANTHER BNAC03G60370D PROTEIN 24 842 - -
Blo13g00543 864 Pfam Malectin-like domain 42 396 IPR024788 -
Blo13g00543 864 SUPERFAMILY Protein kinase-like (PK-like) 493 776 IPR011009 -
Blo13g00543 864 SMART serkin_6 509 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00543 864 Gene3D Phosphorylase Kinase; domain 1 470 584 - -
Blo13g00543 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Blo13g00543 864 Pfam Protein tyrosine and serine/threonine kinase 513 771 IPR001245 GO:0004672|GO:0006468
Blo13g00543 864 ProSiteProfiles Protein kinase domain profile. 509 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00543 864 Gene3D - 213 399 - -
Blo13g00543 864 Gene3D - 39 189 - -
Blo13g00543 864 MobiDBLite consensus disorder prediction 791 849 - -
Blo13g00543 864 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Blo13g00543 864 PANTHER OS07G0166700 PROTEIN 24 842 IPR045272 GO:0004714|GO:0006468
Blo13g00543 864 Gene3D Transferase(Phosphotransferase) domain 1 585 805 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00002 Blo-Chr13:25105 Blo13g00543 Blo-Chr13:27301208 0 dispersed
Blo13g00543 Blo-Chr13:27301208 Blo13g01093 Blo-Chr13:33067197 0 dispersed
Blo01g01225 Blo-Chr1:46209826 Blo13g00543 Blo-Chr13:27301208 0 transposed
Blo07g00811 Blo-Chr7:26032429 Blo13g00543 Blo-Chr13:27301208 1.34E-178 transposed
Blo10g00650 Blo-Chr10:20342746 Blo13g00543 Blo-Chr13:27301208 0 transposed
Blo16g00376 Blo-Chr16:12380593 Blo13g00543 Blo-Chr13:27301208 4.35E-11 transposed
Blo16g00410 Blo-Chr16:15645988 Blo13g00543 Blo-Chr13:27301208 3.68E-40 transposed
Blo13g00543 Blo-Chr13:27301208 Blo04g00525 Blo-Chr4:4529425 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84630 PF12819 Malectin_like 8.80E-41 CL0202 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00543 - - jre:108986963 1314.29