Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo13g00550 | ATGAACACAGCCTCGCCGGAGATGCTCCACTGCCTCACCGCCCCCGTAATCTGCGCTGACACTACCTTCTTGGAGAGACAGACTGGCCGCCTTAAAAGGCACCATGACCAGCTTCCCCACCCCCTCCTCCATAACTACTCTACCTACTCTTTTCCGGCGTCGATTCAGGCCGCTCTGGTCCCTAATTCGCTAACGAGTGGCGGCAAAACGGAGCTCAGTGAGGTTAAGCGAGACATGGGTTTGAAAAACGGGTGGTCGGGAATGGGCAAGTTTGAGATTCCGACCGTGGGTCTTGGGTCTGGATTAGAACTGAATTCTTCAATTTCAAGAACTTCCAGGAGTCCACCGGTTATAATGGAGATGAAGAACAGAGAGTCAGTTTTGTCTGAAAGCTTCAAGAAAAGAAAGACGAACACAAAGATTGTTAATGAGGAAGACACGAAAGAAAAGAGGATCAAAGTATGTGCAGAAGAGGGAGATTCAAAGGTTACAGACCAAATTCCGACGAAAAACAATTCCACTGCCACGACCGCCATTAGAGAAACCTCTGCAGATACATCAAAGGAGAACACAAAAGCTTCCGAGGTTCAAAAACCAGATTACATTCACGTTCGAGCTCGTCGAGGCCAAGCCACTGACAGCCATAGCCTCGCTGAAAGAGCAAGAAGGGAAAAAATTAGTGAGAGAATGAAGTATTTGCAAGATCTAGTGCCAGGATGTAATAAGATTACAGGAAAAGCTGGGATGCTGGACGAAATTATAAACTATGTTCAATCCCTACAAAGACAAGTCGAGTTCTTGTCGATGAAATTAGCTGCGGTAAACCCACGTCTTGACTTCAATCTCAACGTCGATGAAATCTTTCCTAAAGAGGCTCATCCTACTTGTGCTTCACAATTTCCACCAGTAGGTGTACAATCAGAGCTTGATAGCCCTGTCTACCTCCACTTTGATCAGTCACAGCAAATGGGTTCATTCTGTGGGCAGGAAATGAGTTCAGATGGGCTTCGCCGGACAATCAGTGCTCCGGGCTCAATCCCGGAAAATTTTCTCGTACCCACCTGCTTTCCGCCCTCTTCAGCTTGGGATGTAGATTTTCAGAGCCTGTATGACGTAGGATTTGATCAGGGACGAACAGAAGCCTTTCCATCTCAGCCTTACACAGGTTGA | 1170 | 47.18 | MNTASPEMLHCLTAPVICADTTFLERQTGRLKRHHDQLPHPLLHNYSTYSFPASIQAALVPNSLTSGGKTELSEVKRDMGLKNGWSGMGKFEIPTVGLGSGLELNSSISRTSRSPPVIMEMKNRESVLSESFKKRKTNTKIVNEEDTKEKRIKVCAEEGDSKVTDQIPTKNNSTATTAIRETSADTSKENTKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLNVDEIFPKEAHPTCASQFPPVGVQSELDSPVYLHFDQSQQMGSFCGQEMSSDGLRRTISAPGSIPENFLVPTCFPPSSAWDVDFQSLYDVGFDQGRTEAFPSQPYTG | 389 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 27394887 | 27396530 | - | BLOR05831 | Blo13g00550 | 68945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo13g00550 | 389 | CDD | bHLH_AtBPE_like | 200 | 283 | - | - | |
Blo13g00550 | 389 | MobiDBLite | consensus disorder prediction | 165 | 184 | - | - | |
Blo13g00550 | 389 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 210 | 260 | IPR011598 | GO:0046983 | |
Blo13g00550 | 389 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 208 | 279 | IPR036638 | GO:0046983 | |
Blo13g00550 | 389 | Pfam | Helix-loop-helix DNA-binding domain | 214 | 261 | IPR011598 | GO:0046983 | |
Blo13g00550 | 389 | PANTHER | TRANSCRIPTION FACTOR BHLH63-LIKE | 73 | 378 | - | - | |
Blo13g00550 | 389 | SMART | finulus | 216 | 266 | IPR011598 | GO:0046983 | |
Blo13g00550 | 389 | MobiDBLite | consensus disorder prediction | 163 | 195 | - | - | |
Blo13g00550 | 389 | Gene3D | - | 207 | 282 | IPR036638 | GO:0046983 | |
Blo13g00550 | 389 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 73 | 378 | IPR024097 | GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo12g00594 | Blo-Chr12:24232549 | Blo13g00550 | Blo-Chr13:27394887 | 2.53E-44 | dispersed | |
Blo13g00550 | Blo-Chr13:27394887 | Blo15g00700 | Blo-Chr15:22161819 | 2.20E-97 | dispersed | |
Blo13g00550 | Blo-Chr13:27394887 | Blo04g00514 | Blo-Chr4:4377456 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13150 | PF00010 | HLH | 1.00E-06 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo13g00550 | - | - | jre:109013802 | 404.831 |