Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00554 ATGGTGTTTTCTGGTAGCCACTCGGCGGAAGTCCAGGCGTCTAATGATTCCGTCACTCAAACCCTCACTTCCAAAACTACACTTTTTAGCTTAAAGCTTTACATCGTGATCGGAATCGTCGCTGCGTGCGTAATAGCCGCTGCCTTTGGGATTTGCTTATTCTTCCGTAAAAGTAAAAGCTCGAGGAAGAGTATAATGCGAGTAAAGCACATCTCGGGCTTAATTCCGCTAGTCTCAAAGGAGATCGCGGAGATCAAGTCAACGGACAAAATCGAAAATTGCGAAAAGGAGGAGGTAAGAGCTGAGATCATAAATACCATGAAAGTAATTGACGTTGAGATTGGGAGAGGAAAAAAGAGCGAAGAGAGTGATGCATCGGCGTCCAGTGGAAGCCGTAGTGATGTGTCGGTAGAGACACCTAATATCGGTTGGGGGCGATGGTACACCTTAAAGGAGCTAGAGATGGCAACCAGTGGCTTCGCGGGAGAGAATATTATCGGAGAAGGTGGCTATGGGATTGTGTACAGAGGGATTTCGCCGGACCGATCGGTGATAGCTGTGAAGAATCTTCTGAACAATAAGGGTCAGGCAGAGAAAGAGTTCAAAGTTGAAGTAGAAGCTATTGGAAAAGTGAGGCATAAAAACTTGGTGGGTTTGATAGGATATTGTGCCGAAGGTGCTCAAAGGATGCTTGTATATGAGTACGTCGACAACGGAAATTTGGAGCAATGGTTGCACGGGGACGTAGGTTCTGTTAGTCCATTGACATGGGACATTAGAATGAGAATTGCTATTGGGACTGCAAAGGGATTGGCCTATTTGCATGAAGGCTTGGAACCTAAAGTTGTACACCGCGATGTAAAATCCAGCAACATTCTTTTGGATCGGAAGTGGTACCCAAAAGTGTCGGATTTCGGTCTGGCCAAGCTCCTAGGATCTGAGGCTAGCCATGTGACCACCCGTGTTATGGGGACCTTCGGATACGTCTCTCCTGAGTATGCAAGTACAGGTATGCTCAACGAGGGAAGCGATGTGTATAGTTTTGGAGTTTTGCTCATGGAAATTATAACTGGCAGAAGTCCGATTGATTATTCGAAACCTGCGGGAGAGATGAACTTGGTCGACTGGTTTAAAGGAATGGTGGGAAGTCGACGTGGGGATGAGGTTGTAGATCCCCTGATCGAGGTTCAACCCTCGCCGAGAGCTTTAAAGCGTATATTGCTTATTTGTCTTCGCTGCATAGACTTGGATACTCTTAAACGGCCAAAAATGGGGCAAATTGTTCATATGCTAGAAGCTGAGGATTTTCCATTTCGCTCAGAGCTGCGATCGATTAGAGAGAAAGATTCTCATCCCTCGAGCGAAGAAGCTGCCTCCCAATTCAAATATTCATCGAAACGCACCGGCGGGGATGGCTTGGAGCAATCAAGAAGGAAATGCTGA 1443 46.5 MVFSGSHSAEVQASNDSVTQTLTSKTTLFSLKLYIVIGIVAACVIAAAFGICLFFRKSKSSRKSIMRVKHISGLIPLVSKEIAEIKSTDKIENCEKEEVRAEIINTMKVIDVEIGRGKKSEESDASASSGSRSDVSVETPNIGWGRWYTLKELEMATSGFAGENIIGEGGYGIVYRGISPDRSVIAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCAEGAQRMLVYEYVDNGNLEQWLHGDVGSVSPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWYPKVSDFGLAKLLGSEASHVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSKPAGEMNLVDWFKGMVGSRRGDEVVDPLIEVQPSPRALKRILLICLRCIDLDTLKRPKMGQIVHMLEAEDFPFRSELRSIREKDSHPSSEEAASQFKYSSKRTGGDGLEQSRRKC 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 27519862 27522067 + BLOR05835 Blo13g00554 68949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00554 480 PANTHER OS01G0323000 PROTEIN 10 448 - -
Blo13g00554 480 CDD STKc_IRAK 166 432 - -
Blo13g00554 480 Gene3D Phosphorylase Kinase; domain 1 122 235 - -
Blo13g00554 480 PANTHER OS03G0227900 PROTEIN 10 448 - -
Blo13g00554 480 ProSitePatterns Protein kinases ATP-binding region signature. 166 188 IPR017441 GO:0005524
Blo13g00554 480 Pfam Protein kinase domain 163 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00554 480 SUPERFAMILY Protein kinase-like (PK-like) 134 432 IPR011009 -
Blo13g00554 480 SMART serkin_6 160 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00554 480 Gene3D Transferase(Phosphotransferase) domain 1 236 444 - -
Blo13g00554 480 MobiDBLite consensus disorder prediction 456 470 - -
Blo13g00554 480 ProSiteProfiles Protein kinase domain profile. 160 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00554 480 MobiDBLite consensus disorder prediction 444 480 - -
Blo13g00554 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 282 294 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00379 Blo-Chr2:4293998 Blo13g00554 Blo-Chr13:27519862 2.03E-179 dispersed
Blo13g00554 Blo-Chr13:27519862 Blo17g00877 Blo-Chr17:28915243 0 dispersed
Blo13g00554 Blo-Chr13:27519862 Blo04g00509 Blo-Chr4:4313096 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84631 PF00069 Pkinase 1.30E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00554 - - jre:109011190 663.299