Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00584 ATGGAGGACGTTGATACTGCTGTGCACATCGTCTTCTTTCCCTTCGTAGGAGGAGGCCACCAGATTCCAATGATTGACATCGCCAGACTCTTGGCCTCCCATGCAGCCAAATCCACTATCGTTGCAACACCCACCAACGCTCTCCAATTCCAAAATTCCATTCATCGGGATCAACAAGCTGGATGTTTCATCTTCATCCACGCCCTCAATCTGCCGGAAAATTCTGAAATACCGGACAGTGATATGTCCGCCGGTCCATTTACTGACACTTCCATTCTCCGGGACCCTTTTCGTGTTTTCCTCGTAGAAAAACGACCCGATTGTGTCGTCGGCGACGGGTTCCACCGCTGGGCCGCTGATACAATTGACGAGCTTCAGATTCCGAGGATCGCCTTCAGCGGCAACTGCTGCTTCGCTCGGTGTGTTAGAGAATGTCTCACCCGGCACCAGCCGCACTTTGAGGTGGATTCAGATTCAGAGCCTTTCGTTGTTCCGGGGCTTCCTCATCGGATTACGTTGACGAGATCTCAGCTTCCTGTCTTTCTCCGGCAGAAAAATAGTCGATTTGATCTAATCTCAACATCAGAGGAGAAGAGTTTTGGGACAGTGACTAATAGTTTTCTTGACCTGGAGGCAGAGTATGTGAACTTTTTCAGGAATGAAATGGGGAAGAAAGCCTGGCTTCTCGGACCAGTGTCGTTATGCAACAGAAACGGTGCAGATAAGATTGAGAGAGGCAGACCAGCGGCCATTGATGAGCGGAGTTGCTTAAACTGGTTGGATGGCCACAAACCCGGTTCGGTTATCTACATTAGTTTTGGAAGCTTAGCTCATTTGTCTCAGGAACAGCTCCACGAGATTGCGTATGGGTTGGAGGCCTCCCATTTCCCGTTCATCTGGGTAATCGGGAAAATACTCAAATCCACCACGGGAGGAGAGAAAGTGGCAGAAGAAATCATATTACCCGATGGGTTTGAAGAGAGATCGAAGGAATCCCAAAGAGGGCTGATAATAAGAGGATGGGGTCCTCAGCTACTGATTTTAGAGCACGACGCTGTAGGCGGCTTCATCACCCACTGCGGATGGAACTCGGCACTGGAGGGGGTGAGCGCAGGCGTTCCGATGGCGACATGGCCGATGTCAGCGGAGCAATTCTTCAACGAGAAACTGATAACTGACGTGCTGGGAATCGGAGTTCAAGTGGGGAGCACAGAGTGGGCGTATTATAACGAGAGAAAGGAAATGGTGGCAAGAGACAGGGTGGAGAACGCCGTAAACAAACTGATGGGTGGCGGCGAAGAGGCGGTGGAGATGCGGAGGAAGGCCGTCGAGTTGAGCAAAATGGCGAAGCGAGCTGTGGAAGAAGATGGGTCGTCTTTCAGGGATGCTCGTGCTTTAATTGCAGAGCTGAAATCTCTCCGGCGATAA 1428 50.98 MEDVDTAVHIVFFPFVGGGHQIPMIDIARLLASHAAKSTIVATPTNALQFQNSIHRDQQAGCFIFIHALNLPENSEIPDSDMSAGPFTDTSILRDPFRVFLVEKRPDCVVGDGFHRWAADTIDELQIPRIAFSGNCCFARCVRECLTRHQPHFEVDSDSEPFVVPGLPHRITLTRSQLPVFLRQKNSRFDLISTSEEKSFGTVTNSFLDLEAEYVNFFRNEMGKKAWLLGPVSLCNRNGADKIERGRPAAIDERSCLNWLDGHKPGSVIYISFGSLAHLSQEQLHEIAYGLEASHFPFIWVIGKILKSTTGGEKVAEEIILPDGFEERSKESQRGLIIRGWGPQLLILEHDAVGGFITHCGWNSALEGVSAGVPMATWPMSAEQFFNEKLITDVLGIGVQVGSTEWAYYNERKEMVARDRVENAVNKLMGGGEEAVEMRRKAVELSKMAKRAVEEDGSSFRDARALIAELKSLRR 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 27955209 27956636 + BLOR19636 Blo13g00584 68979

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00584 475 Coils Coil 435 455 - -
Blo13g00584 475 PANTHER GLYCOSYLTRANSFERASE 6 473 - -
Blo13g00584 475 PANTHER UDP-GLUCOSYLTRANSFERASE 73B2 6 473 - -
Blo13g00584 475 Gene3D Glycogen Phosphorylase B; 11 461 - -
Blo13g00584 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 394 IPR002213 GO:0008194
Blo13g00584 475 CDD GT1_Gtf-like 9 452 IPR002213 GO:0008194
Blo13g00584 475 ProSitePatterns UDP-glycosyltransferases signature. 341 384 IPR035595 -
Blo13g00584 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 471 - -
Blo13g00584 475 Gene3D Glycogen Phosphorylase B; 241 451 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00584 K14595 AOG; abscisate beta-glucosyltransferase [EC:2.4.1.263] - jre:108999145 630.557
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00617 Blo13g00584 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00584 Blo-Chr13:27955209 Blo13g00587 Blo-Chr13:27998915 1.36E-141 dispersed
Blo13g00586 Blo-Chr13:27971239 Blo13g00584 Blo-Chr13:27955209 2.10E-50 dispersed
Blo13g00583 Blo-Chr13:27952721 Blo13g00584 Blo-Chr13:27955209 2.23E-170 tandem
Blo13g00584 Blo-Chr13:27955209 Blo13g00585 Blo-Chr13:27970507 2.80E-44 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g332 . . . . . Bpe12g00164 . . . . Cma02g00314 . Car02g00195 Car20g00595 Sed01g0615 . . Bhi05g01518 Tan02g0522 Cmetu05g1570 Lac12g0422 Hepe02g0332 . . Cla02g00315 Cam02g0322 Cec02g0323 Cco02g0325 Clacu02g0314 Cmu02g0313 Cre02g0645 Cone12ag1280 Cone8ag1351 Cone3ag1265 . . Csa07g00229 . . Blo04g00617 Blo13g00584 . . Bpe15g00922 . Bma03g00654 Bma08g00700 . Cmo02g00308 . . . . . . Cpe05g01326 . . . . . . . Cla02g01042 . . . . . . Lsi11g01322 . Chy01g00551 Cme11g01009
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000030 8 18 6 6 7 16 1 17 9 18 10 14 10 15 18 12 16 19 2 13 14 14 11 16 7 17 19 18 10 3 364
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00584 Blo_Chr13 FPKM 10.831866 13.546931 9.557952 9.748625 27.912048 31.045734 27.838793 10.180291 9.590117 10.279514