Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00598 ATGCTCACACTTGCACTTCATCATCCCCCTCAAATTCTCCACTTTCAATACACCCACCACCACTTTTCCTTCCCTGGAGACCACAGAATTACAAGATTGTGTTATTTAGAGCGCCACCAACGACCCCGATCGCTTTCGCAACCTCGAGCTGTTCGAGAATGGAAAGAGTACGAGGAAGCCGTAAAGCGCAAGGACCTCGCTGGAGCTCTCAGGCTACTAAAATCCATTGAAGGAGAAACCCAAATGGATCTCGTTAATGGCTCTGCTTCTCGTGAGCCTTGTCGGTCCGGAATTGGCGAGTCGAGGTTCATTGGTCGGGAAAGGGATTGGGACCTTTTAGATACTTGTTTGAATGCGGATGACATGAAGCTTGTTGCAAATACTTATGGCTTCCTCAGGGATAGAGGGTTCTTGCCCAATTTTGGCAAATGCAGGAACATTGGCCCTTTACCCCCAAAGACTGTATACGCGATATGGATCAGCATTTGGATGCGTATATATACTGCAATTGATCATAACAAAGTAGATTATAGCAGTTTCCCTAGAATTTTATTGTTGGAAGGAGCGAGAGATGTTACCCCATCTGTATTGAAGTCTTCAACTGGGTTAGAAGTGTCCAAGTTGTCTCCAAAGAAATGGGGTCTTTCGGGAAGCTCTCAACTAGCATTGCTTGCTTTACTTGGAGGTACATCATTTCTTATTTCTCAGGGCATAGATATCAGGCCTAATCTCACAGCAGTATTGGGGCTAGCATTTCTGGACTCTATCTTTCTTGGTGGTACGTGTTTAGCTCAAATATCAAGTTATTGGCCTCCAAATAGGCGTCGAATCTTGGTCCATGAAGCTGGCCATCTCTTGATTGCTTATCTTATGGGTTGCCCTATCCGTGGGGTGATTTTGGATCCAATTGTTGCAATGCAAATGGGGATTCAAGGGCAGGCTGGAACTCAATTTTGGGACGAAAAAATGGCTAATGACCTTGCTGAAGGACGTTTGGATGGCTCTTCATTTGACAGATATTGCATGGTGCTTTTTGCAGGAATTGCAGCTGAAGCTCTTGTCTATGGTGATGCCGAGGGGGGAGAAAATGATGAAAATTTCTTCAAAAGTATTTGTGTTCTTTTGCAGCCTCCATTGTCTGTTGCCCAGATGTCAAATCAAGCAAGATGGTCAGTTCTTCAATCGTTCAATCTGCTCAAGTGGTATAAACGGCCTCATCAAGCAGTCGTTAAAGCTCTGGAAAGTGGATGCAGTCTCAGTGCTGTGATTCGGAGAATGGAAGAAGCTATCTTAGCGAATAGATGA 1305 44.75 MLTLALHHPPQILHFQYTHHHFSFPGDHRITRLCYLERHQRPRSLSQPRAVREWKEYEEAVKRKDLAGALRLLKSIEGETQMDLVNGSASREPCRSGIGESRFIGRERDWDLLDTCLNADDMKLVANTYGFLRDRGFLPNFGKCRNIGPLPPKTVYAIWISIWMRIYTAIDHNKVDYSSFPRILLLEGARDVTPSVLKSSTGLEVSKLSPKKWGLSGSSQLALLALLGGTSFLISQGIDIRPNLTAVLGLAFLDSIFLGGTCLAQISSYWPPNRRRILVHEAGHLLIAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKMANDLAEGRLDGSSFDRYCMVLFAGIAAEALVYGDAEGGENDENFFKSICVLLQPPLSVAQMSNQARWSVLQSFNLLKWYKRPHQAVVKALESGCSLSAVIRRMEEAILANR 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 28405543 28407955 - BLOR19650 Blo13g00598 68993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00598 434 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE 38 148 - -
Blo13g00598 434 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE 183 432 - -
Blo13g00598 434 SUPERFAMILY FtsH protease domain-like 270 415 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Blo13g00598 434 Gene3D Peptidase M41 267 373 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Blo13g00598 434 PANTHER - 38 148 - -
Blo13g00598 434 PANTHER - 183 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00598 Blo-Chr13:28405543 Blo18g00595 Blo-Chr18:9144603 5.97E-19 dispersed
Blo13g00598 Blo-Chr13:28405543 Blo04g00983 Blo-Chr4:12516644 2.17E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00598 - - csv:101213430 536.569