Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00602 ATGAACAACCAGACGAATTACGGGAAAAGAGAACGACGGAGAGCTGCAGATCTGCCATTCGAAGCTGCAACTTCGAGCGGCAGTCTCCAGAGTGAGCCTCTAGGAAGCATGCACAAATTGGGCAGAGGTCACCGCGATAAAGTCCAGCAGTTTATGACTATAACTGGAGCGAGTGAAAAACTTGCCCTTCATGCTTTGAAAGCTAGTGATTGGCATCTTGAAGGAGCGTTTGATGTATTTTACAGTCAACCTCAGATTAAAACATTTACTGATTCAAGACATTTGGAAGAGCTTTACAATAGATATAAAGGCGAGCACCCCTTTTTAGATCACATGTTTCTCTACTTACATCTAAAGTTGGATTTTTTTTTATCTTGTGCAGATCCTTATGTTGATATGATACTGGCTGATGGTATAACTACTCTCTGCAGTGATATTCAGGTGATGGTTCTGGCTATTGGTCAATCAATATTTATTATAGTTGATCCTCAAGACATAGTCACGTTGGTTGTCTCATGGCACATGAAGGCAAATACTATGTGTGAATTTTCAAAACAGGAGTTTATTGGTGGATTGCAATCATTGGGGATTGAATCCCTTGAGAAGTTTCGAGAAAGGATACCCTTCATGCGCTCAGAGCTGAAAGATGAACATAAGTTCCGTGAAATCTACCTTTTTGCATTTGGCTGGGCGAAAGAAAAGGGTCAAAAATCTTTGGCATTGGACACGGCAATAGGAATGTGGCAATTGCTGTTTGCCGATAGGGAGTGGCCTTTGGTTGATCACTGGTGTCAATTCCTACAGGCTCGACACAATAAAGCTATCTCGAGGGACACGTGGTGTCAGCTACTGGAGTTTGCTAGGATGGTAGACACTACGCTTTCAAATTACGATGCTGAAGGGGCTTGGCCTTATCTTATTGACGAATTCGTCGAATACTTGAATGAGAATGGCATTACCCAAAGTGATGAGTCGAATGACCAAAAACGATGA 993 42.2 MNNQTNYGKRERRRAADLPFEAATSSGSLQSEPLGSMHKLGRGHRDKVQQFMTITGASEKLALHALKASDWHLEGAFDVFYSQPQIKTFTDSRHLEELYNRYKGEHPFLDHMFLYLHLKLDFFLSCADPYVDMILADGITTLCSDIQVMVLAIGQSIFIIVDPQDIVTLVVSWHMKANTMCEFSKQEFIGGLQSLGIESLEKFRERIPFMRSELKDEHKFREIYLFAFGWAKEKGQKSLALDTAIGMWQLLFADREWPLVDHWCQFLQARHNKAISRDTWCQLLEFARMVDTTLSNYDAEGAWPYLIDEFVEYLNENGITQSDESNDQKR 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 28431058 28437535 - BLOR19654 Blo13g00602 68997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00602 330 Gene3D - 158 215 - -
Blo13g00602 330 Gene3D - 42 83 - -
Blo13g00602 330 PANTHER RP42 RELATED 49 103 IPR014764 -
Blo13g00602 330 CDD UBA_DCNL 44 84 - -
Blo13g00602 330 SUPERFAMILY UBA-like 43 82 IPR009060 GO:0005515
Blo13g00602 330 Gene3D Cullin, PONY binding domain 216 324 IPR042460 -
Blo13g00602 330 Pfam UBA-like domain 45 83 - -
Blo13g00602 330 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 49 103 - -
Blo13g00602 330 Pfam Cullin binding 203 313 IPR005176 -
Blo13g00602 330 ProSiteProfiles DCUN1 domain profile. 90 315 IPR005176 -
Blo13g00602 330 PANTHER RP42 RELATED 121 322 IPR014764 -
Blo13g00602 330 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 121 322 - -
Blo13g00602 330 MobiDBLite consensus disorder prediction 1 39 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00462 Blo13g00602 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00135 Blo-Chr10:1531267 Blo13g00602 Blo-Chr13:28431058 1.82E-21 dispersed
Blo13g00602 Blo-Chr13:28431058 Blo07g00680 Blo-Chr7:22151830 5.31E-12 dispersed
Blo13g00602 Blo-Chr13:28431058 Blo04g00462 Blo-Chr4:3840798 1.07E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00602 K17822 - zju:107412778 449.514