Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00605 ATGCTTCTGCAACTTGAATCGCATTTGTTCTGGAATCTCTCTTCCAGCAGAAGAATGTTCCACCCAAAGAAGCCATCAACTATGATTTCTCACGATCAAGGCGACTCTGGCCTGGTCCTCACCACAGACCCCAAACCCCGCCTCCGATGGACCCTCGAGCTCCATACACGCTTTGTCGAGGCCGTCACCCAGCTCGGAGGCCCTGATAGAGCAACCCCAAAGACCATCATGAGGGTTATGGGTGTGAAGGGTCTAACTCTGTACCATCTCAAAAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAACCTCATAAAGAATTCACCGATCACTCGATTAAGCATGCTTCTTCCTTAGAACTTCAGCGAAACACGCCGTCTCCATCCAACGTTGTCATTGGCCGCAATACGAATGATAACTCGCACATGGTCGATGCAACTAAGATGCAAATGGAGGTGCAGCGAAGACTGCATGAACAAATAGAGGTGCAAAGGCATCTTCAACTGAGAATGGAGGCTCAAGGGCAGTACATGCAAAGTATACTAGAGAAGGCATGTCAAACCCTTGTCAGTGAAAATATGGCTTGGGGAGGATCATCCTTCAAGGCAATGGTTCCTTGTTTTCAAGAACTTAACCTCTGGGGAAGAGACCAGTTTGACTTCGACGAACAAATGGATGGTTTTCTGCCCACTGACGACGACATTTGTCTTGAGAAGGAGAGTAGCTCGTATAGCGATGGTGGAAAGAGCCAGCTTCTCTGGTCAGAAGGTCTCCAGCTTCATGTGTTAGGGATGGCGGCAGCTTCAGGCGCTTTTGAAGGAGAGAGAATTGCGGATCTATTCTAG 843 48.64 MLLQLESHLFWNLSSSRRMFHPKKPSTMISHDQGDSGLVLTTDPKPRLRWTLELHTRFVEAVTQLGGPDRATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFTDHSIKHASSLELQRNTPSPSNVVIGRNTNDNSHMVDATKMQMEVQRRLHEQIEVQRHLQLRMEAQGQYMQSILEKACQTLVSENMAWGGSSFKAMVPCFQELNLWGRDQFDFDEQMDGFLPTDDDICLEKESSSYSDGGKSQLLWSEGLQLHVLGMAAASGAFEGERIADLF 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 28469327 28470685 + BLOR19657 Blo13g00605 69000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00605 280 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Blo13g00605 280 Pfam MYB-CC type transfactor, LHEQLE motif 143 187 IPR025756 -
Blo13g00605 280 Gene3D - 44 102 - -
Blo13g00605 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 19 255 - -
Blo13g00605 280 Pfam Myb-like DNA-binding domain 48 96 IPR001005 -
Blo13g00605 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 19 255 IPR044848 GO:0003700
Blo13g00605 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Blo13g00605 280 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00605 Blo15g00640 CCT
Blo04g00455 Blo13g00605 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00605 Blo-Chr13:28469327 Blo16g00685 Blo-Chr16:26475340 1.86E-66 dispersed
Blo13g00605 Blo-Chr13:28469327 Blo04g00455 Blo-Chr4:3788347 9.13E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13157 PF00249 Myb_DNA-binding 1.80E-06 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00605 - - vri:117908572 340.887