Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00608 ATGAGGGCGTTGTTGGTTCACCAAGGATTGGCCCAAGCCATTGATGAACCAGCGATGAAAGCTCTGAAGGAATCCATTAGAAGTATTTATGCTTTGAAGGAATTGAAATTCAGGAAAATTATATCGTTCTATTCGAAAAGAAAAGACACAGCTGCTGTTCCCAAAGAATTTCTGTGCTCAATTTCAGGAGAACTCATGCAAGACCCTGTTCTAACGACGAGCGCCGAGACTTATGATAGAGAGTCCATTGAGAGGTGGTTTTGTGCAGTTTGCATGGCATGCCCAAAGACCAAGAAATCTCTTCATAACACGACTCTTACTCCGAATTTGCTAGTTCGACAAATCATCAGAAGATGGTGCAAAGGAAACGGAATCGAGCCTCCAGAACTCGATCCCGGCGAGGACGAGGAGCTGGAAGTGGGCCCACCCAGAGCCGATAGAGCTCGTCTAGAAAAATTGCTAGAGAAAATGTCGTCGTCATTCCTATCGGATCAAAAAGAAGCTGCAAAGGAGATCAGCATGTTGACAGCAGCCTTTCCGGCAGCTCGAAGTTTTCTGGTCGAGTCCTCCAACGACATTTTCAAGCTGCTTAATCCACTCTTATCCAGAAGTGTTGTAGTGGATCCGGGTCTGAGGGAAGATTTGATCACGGCAATTTATGACATCTCATTGGGATATGTAAGTGAGCGGAGTCCATTTTCTTCATCCGGTATTCATGTTGAGGTGGAGTCAACTGAGGAAGGAGGTGTAGTTTATGTGGACAAGCTGCTGGATTACAAAGTTTCCAAGGACAAACTGGAGAGAGTCATCAAACCGGTTCAGAGGTTTGAATATGCTAGGAAAAGTGCATATGTTCTCAAGATTAGTTTGTGTAAATCAGGAGCTAAGGAAAGCAGTGACATAATGCTGCAAAAGAAAACTCCACGGTATTGGAACAACTGGTTGAATGGGTTTGTTTCAAGGAAATGTATATCTTCAGGAGTTTCAAAATCAATATTAAGGTGGACATGGATTCAAGGGGCTTTAAACTTGCTGGAAATAATCAACAGCGTGGGTCTAATAAAGCTGTATGAAAAAGGCTCTGTTCTTGGTGCGAAAATCAGGGGCGAACAGAGTGCTACAGTGGAGATCACTAGTTCTTCGTCTGGATCACAGTGTTGTATGGTGAGCCTTTACGCAACATTCCTCTTCTCTACTCTCGCCGACTCCGTGCTTGACCGTAAAAACAGCCTTTTTCTTTCCTGCCTAACAATATCCATCTCTGCTCTACTCACAGCCTTCTCTACCAACATTTGGATCTACACCGCCTTGCGATTCCTCTGTGGATTAGGCCGCGCAACAATCGGAACGTCCGCGCTCGTCCTATCAACAGAGCTCGTCGGAAGAAAGTGGAGAGGCCAAGTCGGCGTCGTCGGATTCTTCTGCTTCACTCTCGGGTTTCTATCCTTACCTGCGTTAGGTTATACATGCAGGGCCTTGTCTTGGAGAGCTCTCTATTTATGGACCTCAATTCCAACTCTCTTCTACTCTTTTCTGGTTCATTTTACGGTTTACGAATCGCCAAGATGGCTTCTAGTCCGAGGTCGCAAAGAAGAAGCAGTAGTTATTCTCCGGCGAATGTCGTCGACTAAAGTGAGCTTTTCCGGAATCTCAATGGAGCCAGAAACGTGGAATATAAACCCCTATTCCAACATTAAAATCCTTTTCAAGAAAAAATGGGCGTTCCGTCGGCTAGCGGTGGTTATGTTGATAAGCTTCGGAATCGGAATGGTGTACTACGGAATGCCATTGAGTCTCGGAAATTTATCCTTCAATTTCTACTTGAGCGTCACCTTTAATGCTCTCTCAGAGCTACAAGCATCTCTTATAACCTTCTTCCTCATCGACAAAATGAACCGGAGAAGCTCCATCCTAGGGTTTGCTGTTCTTACCGGAGTTTTCAGTGTGATGTCTGCCATGAAAGGACGGGTGTGGGGGAGGTTTCAGATTGGGTTAGAGCTGGTGTCTTTCTTCAGCGCTTGTACGGCGTTAAACGTGTTGCTGATATTCGCAATCGAGTTGTTTCCGACGAGCGTGAGGAACTTAGCTGTATCAATGGTGCGGCAGGCACTGGTGTTGGGGGGAGTGATCACTCCGATGATTGCGGCGGCGGGGATTGAAGAAGAGGGTTTGTCCTACGTGGTGTTCGGAGTTGTTATAGGGTTAAGTGGGCTTTTTGCGATGTGTTTGCCGGAGACTAGGGGTAAGCCGACTTGCGACACCATGGAAGAAGAGGAAATTAAGAATTTACGTCTCCTCTTCGGCTCTCCAGCCTTTTCAAAGGCTCATTTCCTCCAATCAAGATTGTGTCAGATCTCCGTTTTGAAGATTCATGGTGAATCTGTGTACTCTGCAATCCAGATTGTCATCTCCTCGCTTTTCTCTTTGTGTCGATTTATGTGCGTTTTTGATGATTCCCTTCATTTGGGTATGTCTGGTGTAGATCTTTGTGTTGCTCCAACCTCTCAGCTTCTGCTGGAATGGTACAACGCTCAGCTACGGTACAACGCTCAGCTACGGTCTCGGACTAGTGTGTTCATCGGAAACTGCTATTTTGTCTCGCCGGAGATCGTAACCTTTCCATTCCCTTACATGAGGGCTGTAACCCTGAAAGTGAAGCCCCGGTTCTAG 2670 46.03 MRALLVHQGLAQAIDEPAMKALKESIRSIYALKELKFRKIISFYSKRKDTAAVPKEFLCSISGELMQDPVLTTSAETYDRESIERWFCAVCMACPKTKKSLHNTTLTPNLLVRQIIRRWCKGNGIEPPELDPGEDEELEVGPPRADRARLEKLLEKMSSSFLSDQKEAAKEISMLTAAFPAARSFLVESSNDIFKLLNPLLSRSVVVDPGLREDLITAIYDISLGYVSERSPFSSSGIHVEVESTEEGGVVYVDKLLDYKVSKDKLERVIKPVQRFEYARKSAYVLKISLCKSGAKESSDIMLQKKTPRYWNNWLNGFVSRKCISSGVSKSILRWTWIQGALNLLEIINSVGLIKLYEKGSVLGAKIRGEQSATVEITSSSSGSQCCMVSLYATFLFSTLADSVLDRKNSLFLSCLTISISALLTAFSTNIWIYTALRFLCGLGRATIGTSALVLSTELVGRKWRGQVGVVGFFCFTLGFLSLPALGYTCRALSWRALYLWTSIPTLFYSFLVHFTVYESPRWLLVRGRKEEAVVILRRMSSTKVSFSGISMEPETWNINPYSNIKILFKKKWAFRRLAVVMLISFGIGMVYYGMPLSLGNLSFNFYLSVTFNALSELQASLITFFLIDKMNRRSSILGFAVLTGVFSVMSAMKGRVWGRFQIGLELVSFFSACTALNVLLIFAIELFPTSVRNLAVSMVRQALVLGGVITPMIAAAGIEEEGLSYVVFGVVIGLSGLFAMCLPETRGKPTCDTMEEEEIKNLRLLFGSPAFSKAHFLQSRLCQISVLKIHGESVYSAIQIVISSLFSLCRFMCVFDDSLHLGMSGVDLCVAPTSQLLLEWYNAQLRYNAQLRSRTSVFIGNCYFVSPEIVTFPFPYMRAVTLKVKPRF 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 28499293 28503924 + BLOR19660 Blo13g00608 69003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00608 889 ProSiteProfiles Major facilitator superfamily (MFS) profile. 336 748 IPR020846 GO:0022857
Blo13g00608 889 Pfam Sugar (and other) transporter 376 751 IPR005828 GO:0016021|GO:0022857|GO:0055085
Blo13g00608 889 ProSiteProfiles U-box domain profile. 52 126 IPR003613 GO:0004842|GO:0016567
Blo13g00608 889 Pfam U-box domain 53 123 IPR003613 GO:0004842|GO:0016567
Blo13g00608 889 SMART Ubox_2 56 119 IPR003613 GO:0004842|GO:0016567
Blo13g00608 889 SUPERFAMILY RING/U-box 45 127 - -
Blo13g00608 889 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 126 IPR013083 -
Blo13g00608 889 Gene3D MFS general substrate transporter like domains 353 757 IPR036259 -
Blo13g00608 889 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 3 384 762 - -
Blo13g00608 889 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 384 762 - -
Blo13g00608 889 SUPERFAMILY MFS general substrate transporter 393 750 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00925 Blo-Chr7:28326005 Blo13g00608 Blo-Chr13:28499293 2.35E-51 dispersed
Blo13g00608 Blo-Chr13:28499293 Blo10g00673 Blo-Chr10:21604615 4.96E-36 dispersed
Blo13g00608 Blo-Chr13:28499293 Blo11g00425 Blo-Chr11:3699585 4.14E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00608 - - fve:101312997 501.516