Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00613 ATGATGACGGGCAATGGACAACTGACTGTGCCTCCTGGGTTTAGATTCCACCCCACGGATGAGGAGCTTCTGCACTATTATCTCAGAAAGAAGGTCTCTTACGAGGCCATCGACCTTGATGTAATTGGGGAAGTTGATCTCAACAAGCTCGAGCCTTGGGACCTTAAAGAAAAATGTAGAGTTGGAAGTGGGCAACAGAGTGAGTGGTATTTCTTCAGCCACAAGGACAAGAAATACCCAACTGGTACTCGAACAAATAGGGCAACCATGGCTGGATTTTGGAAGGCGACTGGGAGGGACAAACCCATCCATCTCCCTGAATACTCAAAAAAAATCGGCATGAGGAAGACCCTCGTTTTCTACACTGGCCGGGCACCTCATGGCCAGAAAACCGATTGGATCATGCATGAATATCGGCTCGACGATCAAAACAACGACCAACTTCAGGAGGAAGGCTGGGTTGTCTGCAGGGTTTTCAAGAAGAAGAACTACATCCGAACCTTCCAACCAGATTCTTCTTCTCCAGAGAACTTTAATTACCAGAAGGCAAGCACAAGTCCAGGCCGATTAACCAAACATAATCAAATTCAACCTGCTTCGACTGATTACGGCTTTGGTACTTCCCTGCATCTGCCGCAGCTGTTGAGCCCCAATTCAGTCGCGGCAGCTCCACCTTTCGGATCTTCAATTTCTTTGAACCCAGGGGTGGGATCAGTTGGGTATCCACAACTCTGCAGAAGCTCGCAGTGGGAGAGGTTTGGAGATTGGTCGCTATTGGACAAGCTTCTTGCTTCGAGCTCCAACAATGGAGTCAAAGGGGCAGGTCTGAGTTTCCACAATGGAGGTGATGATGTTAGGGGTTCAACTCAGAATTTTCTGTTTCAATACCTTGGAGCAGGAACTGGAAGTAGAGAAGCACAGAGACCGAGGTTTTGA 936 48.18 MMTGNGQLTVPPGFRFHPTDEELLHYYLRKKVSYEAIDLDVIGEVDLNKLEPWDLKEKCRVGSGQQSEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKPIHLPEYSKKIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDDQNNDQLQEEGWVVCRVFKKKNYIRTFQPDSSSPENFNYQKASTSPGRLTKHNQIQPASTDYGFGTSLHLPQLLSPNSVAAAPPFGSSISLNPGVGSVGYPQLCRSSQWERFGDWSLLDKLLASSSNNGVKGAGLSFHNGGDDVRGSTQNFLFQYLGAGTGSREAQRPRF 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 28547654 28549522 - BLOR19665 Blo13g00613 69008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00613 311 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 270 - -
Blo13g00613 311 Gene3D NAC domain 19 166 IPR036093 GO:0003677|GO:0006355
Blo13g00613 311 PANTHER PROTEIN SOMBRERO 6 270 - -
Blo13g00613 311 ProSiteProfiles NAC domain profile. 10 161 IPR003441 GO:0003677|GO:0006355
Blo13g00613 311 Pfam No apical meristem (NAM) protein 11 140 IPR003441 GO:0003677|GO:0006355
Blo13g00613 311 MobiDBLite consensus disorder prediction 171 193 - -
Blo13g00613 311 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00447 Blo13g00613 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00613 Blo-Chr13:28547654 Blo13g00111 Blo-Chr13:2092747 5.66E-59 dispersed
Blo02g00952 Blo-Chr2:36922996 Blo13g00613 Blo-Chr13:28547654 1.33E-85 transposed
Blo03g00403 Blo-Chr3:10932887 Blo13g00613 Blo-Chr13:28547654 4.43E-71 transposed
Blo03g00798 Blo-Chr3:33190114 Blo13g00613 Blo-Chr13:28547654 5.74E-85 transposed
Blo04g00892 Blo-Chr4:10232082 Blo13g00613 Blo-Chr13:28547654 2.45E-84 transposed
Blo06g00317 Blo-Chr6:18196826 Blo13g00613 Blo-Chr13:28547654 1.17E-82 transposed
Blo12g00802 Blo-Chr12:26407253 Blo13g00613 Blo-Chr13:28547654 1.13E-64 transposed
Blo13g00613 Blo-Chr13:28547654 Blo04g00447 Blo-Chr4:3690617 3.59E-129 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13159 PF02365 NAM 3.00E-37 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00613 - - pop:7464581 376.326