Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00651 ATGAAAACCCTAGTACTTAACCCTCAGAACATCGCCGTTGAGCTCTACTCCAACATTGCTTCCACTTCCAGTCTCTCCGATAACTTCGTGGTTTGCGGTCAACTCTTCGAAGTATCAGTTGAGAGATGTCTGCTAGGTGAAATGACGTTTCAAATAAAGTGTCACAACGACGTTCACACTTGCTCGAGAAAGATGGAAAGCCATCATGCCTCTACCAAACGGGTAGCAAGCGGAGCATCGGTTTTGCATCACGGCAAGTCCATCGAATATGGAATATCAGATAATGGGGTTGAGAGCAAACCTTTGCAGATATGGGATAAGGAAGTTTCCAATGGCCACATAAAGCGGCCTCAAGATGAAGATATTCAATCCAATGTGCTTGAAATCATTGGGACAAAAATCCAGTCCACTTATATTACTTGTCCTGCAGACCCAGCTGCAACACTGGGCATAAAACTACCCTTCCTGGCAATCATCGTGAAGAATCTAAAGAAGTATTTTACATTTGAAATACAAGTGCTAGATGATAAAAATGTCAGGAGACGCTTCCGAGCTTCTAATTTTCAAGCTGTAACTAGAGTAAAACCATATATCTGCACCATGCCACTGAAATTGGATGAGGGATGGAATCAAATCCAGTTAAATCTGGCCGATTTTACCAGAAGAGCCTATGGCACAAACTATGTAGAGACATTACGAGTTCAAGTTCACGCAAACTGTCGCCTGAGGAGGATCTATTTTGCTGACAGGTTGTACTCCGAAGAGGAGCTTCCTCCCGAATTTAAGTTGTATCTTCCAATGCAGGTAAATACGAACGATCCGCGTCAGCCCTCGGCGGCAAAGCCGTTCGTTGTTCCGACGGTAGACCCGCAGGATCTTCCGGTAGACTATTCTGGATTCATCGCCGTCGTTTTCGGGATAGCTGGTGTCATGTTCAGGTACAAGCTGAGCTCGTGGTTGGCAATCATCTTCTGCGCTCAGTCGCTGACTAACATGAAGAACTTGGAAAACGATCTCAAACAGATCTCTATGGCTATGATAATTGAAGCAATTGAACTTTCAGTGGGTTACAGGTTCTGGGGAGATCATGCTAGGGTTTTGATGAGTCCACCTGCTATGGATAGTATGGAAGATATGAAGTTTTCAGCCTCACAGTCCAACAATTCTCATACAGCTGGGGAAGAGGGAGATAATGTTGAAGCTCGATTCTCAGATTTTTGCAAGAACGGGCTCTCTCTTGATGACAACTGTCATGCTCAAGCTTTGAAGCTCTTCGGGGAAACTAAACACTTTCTTTTGAACAATATGACAGCTATAGGGAGCGGAGCACTTGAAGAAGCAGAGCGGTACTGGTTTGCATTCATTTTATACTCTGTGAAAAGGTTGAGTGAAAATAATGCAGATAGTCCACAGCAGGGATCCGATGAAAGTGGGTTGAACTTATGCCATATTTTAAGGAAAGCAAAGCTGAACATTGTCGATTTTTTCAAAGAGTTGCCTCAATTTGTTGTAAAGGCAGGTTCTATTTTAAGTAATATGTGCGGTTCAGATTGGGAAAGTAGACTTGAGGCAAAGGAGTTGCAAGCTAATTTTGTGCACCTGAGTATTTTAAGCAAGTACTATAAACGTGTATACCAGGAATTATTTACTAACGATGCTAATGCCAATAAGCAGCCAACTACTCTCAGTTCCCTAGGTTACGTTTCAGACTACCAACGATTTGGATGGTTGCTATTTTTGGCACTTCGAGTACACACATTTAGCCGTTTCAAAGACTTAGTGACTTGTACCAATGGCCTACTTTCTATTTTGGCTATCTTGATAATTCACCTTCCTGTCAAATTCAGAAACTTCAACATACTTGAATCTCAACGCTTTGTTAAGAAAGGCAATGGTGGAGTAGATCTGATTGGATCACTGTGCAACATGTATGAAACCTCAGAAGAAGAATTGAGGAAAACAATGGAAAAGGCTAATAATCTGATTGAAGACATTTTGAAGAAGAAATCTTGTCCAGCTTCTGAATGTTCTAGTGAATGTCTGAAGAATATTGATACAGATGGTTTGATGCACTTTGAAGATCTAATGGAGGGATCATCTTTATCATCGAGTTTAGATATTTTAGAGAAGGATTATGAAAATGCAGTTCGGAATAAGGGTGAATTTGATGAGAGAATATTCATCTATGAAGAAGACAGCTTACTTGGTTCAGGAAGTTTGTCTGCGGGTGCTACTAATATAATCGGCATCAAAAGAAAGTTTGATTTAATGGCATCGCCTGCTAGGACAGTAACGAGCCCTCTGTCTCCTCTTCGTTCCCCTGCTTCTCAATCCAATGGTATTCACGGAGTTGCTAACTCTAAGGTTGCTGCAACACCAGTGAGCACAGCAATGATAACAGCAAAGTGGCTACGGACTGTTATTTCTCCTCTTCCAGCTAAACCCTCAGCTGAGTTAGAGCACTTTCTGTCTTCTTGTGATAGAGATGTATCTAATGATGTAGTTCGCAGGGCACTTATTATATTAGAGGCCATATTTCCAAGTAGTTCTTGTGGAGATCATTGTATAGCTGGAAACTTACGTAGTGCAAACCTCATGGACAACATTTGGGCAGAGCAACGAAGACTAGAAGCACTCAAGTTATATTACCGAGTTTTGGAAGCAATGTGCAGAGCAGAGGCTCAAATATTGCATGCGAATAATTTGACCTCTCTACTAACCAATGAGAGGTTCCATAGGTGTATGTTGGCCTGTTCTGCCGAACTTGTTCTGGCAACACACAAAACTGTTACGATGTTGTTTCCTGCGGTGTTGGAGAGGACTGGCATTACAGCCTTTGATCTTAGCAAGGTGATAGAGAGTTTCATAAGACATGAAGAATCTCTACCTAGAGAATTGAGGCGGCACTTGAATTCATTGGAAGAACGACTGTTGGAGAGTATGGTGTGGGAAAAGGGTTCATCAATGTATAATTCTTTGATAGTTGCAAAGCCAGTTCTTACGATAGAAATAAACCGTCTAGGGTTTTTAGCAGAACCAATGCCATCTTTGGATGCAATTGCATTGCTCATAAACTTTTCTGGTGTTGGGTTGCCCCCTGTGCTTAATTTACAAAAGCATGAGATCGTCCTAGGTCAGAATGGAGATATTAGGTCTCCAAAAAGATTGTGCCCAGATTATCGAAGTATGTTAGTGGAGCGAAATTCCTTTACTTCTCCAGTGAAGGAGCGACTAATGGGCATTAGTAACCTTAAATCAAAGTTACTGCCACCTCCTTTACAGTCCGCCTTTGCGAGTCCTACACGTCCTAATCCTGGAGGTGGAGGGGAAACATGTGCCGAAACTGGAATTAACATATTCTTTAGCAAAATTGTTAAGTTGGCTGCGGTTAGAATCAATGGTATGGTTGAAAGGCTGCAACAGTCTCAGCAAGTACGGGAGAATGTCTACTACCTTTTTCAACAAATCCTTAACCAGAAGACTTCACTTCTTTTCAATCGTCACATTGACCAGATCATCCTTTGCTGTTTCTATGGCATTGCGAAGATTTCTCAATTAAATTTGACATTTAAAGAAATCATTTACAATTATAGGAAGCAACCACATTGCAAAACACAAGTTTTTCGCAGTGTGTTTGTTGATTGGTCACTGGCCCGCCGTAACGGAAGAACCGGACAGGATCATGTTGATATAATCACATTCTACAATGAAATGTTCATCCCTGTTGTGAAACCTCTGCTGGTTGAGATTGGCCCTGCTGGTCCTACTACAAAAACTAATAGAGTTCCTGAAGGTTCCAGCAACAATGATGCACCATGTCCTGGATCGCCAAAAAGATCTCCGTTCCCAAGTCTTCCTGATATGTCACCCAAAAAAGTTTCTGCTACACATAATGTATACGTCTCTCCGTTAAGATCATCAAAGATGGATGCCTTAATTTCACACAGCTCCAAAAGCTATTATGCTTGTGTAGGAGAGAGTACTCATGCATATCAGAGCCCTTCAAAAGACTTGACTGCCATAAACAACCGCTTAAATGGGACTCGGAAGCTCCGCGGAACGCTCAATTTTGACGATGTAGATGTTGGTTTGGTGAGTGATTCAATGGTCGCCAACAGCCTTTGCCTTCAAAACGGGAGCTGTGCATCTTCGTCGGGCACGCCAATGAAATCAGAACAACCTGACTCCTGA 4191 42.11 MKTLVLNPQNIAVELYSNIASTSSLSDNFVVCGQLFEVSVERCLLGEMTFQIKCHNDVHTCSRKMESHHASTKRVASGASVLHHGKSIEYGISDNGVESKPLQIWDKEVSNGHIKRPQDEDIQSNVLEIIGTKIQSTYITCPADPAATLGIKLPFLAIIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLKLDEGWNQIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPMQVNTNDPRQPSAAKPFVVPTVDPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLTNMKNLENDLKQISMAMIIEAIELSVGYRFWGDHARVLMSPPAMDSMEDMKFSASQSNNSHTAGEEGDNVEARFSDFCKNGLSLDDNCHAQALKLFGETKHFLLNNMTAIGSGALEEAERYWFAFILYSVKRLSENNADSPQQGSDESGLNLCHILRKAKLNIVDFFKELPQFVVKAGSILSNMCGSDWESRLEAKELQANFVHLSILSKYYKRVYQELFTNDANANKQPTTLSSLGYVSDYQRFGWLLFLALRVHTFSRFKDLVTCTNGLLSILAILIIHLPVKFRNFNILESQRFVKKGNGGVDLIGSLCNMYETSEEELRKTMEKANNLIEDILKKKSCPASECSSECLKNIDTDGLMHFEDLMEGSSLSSSLDILEKDYENAVRNKGEFDERIFIYEEDSLLGSGSLSAGATNIIGIKRKFDLMASPARTVTSPLSPLRSPASQSNGIHGVANSKVAATPVSTAMITAKWLRTVISPLPAKPSAELEHFLSSCDRDVSNDVVRRALIILEAIFPSSSCGDHCIAGNLRSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQILHANNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVAKPVLTIEINRLGFLAEPMPSLDAIALLINFSGVGLPPVLNLQKHEIVLGQNGDIRSPKRLCPDYRSMLVERNSFTSPVKERLMGISNLKSKLLPPPLQSAFASPTRPNPGGGGETCAETGINIFFSKIVKLAAVRINGMVERLQQSQQVRENVYYLFQQILNQKTSLLFNRHIDQIILCCFYGIAKISQLNLTFKEIIYNYRKQPHCKTQVFRSVFVDWSLARRNGRTGQDHVDIITFYNEMFIPVVKPLLVEIGPAGPTTKTNRVPEGSSNNDAPCPGSPKRSPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGTRKLRGTLNFDDVDVGLVSDSMVANSLCLQNGSCASSSGTPMKSEQPDS 1396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 29149066 29166373 - BLOR19703 Blo13g00651 69046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00651 1396 Gene3D - 571 728 - -
Blo13g00651 1396 SMART cyclin_7 1130 1248 IPR013763 -
Blo13g00651 1396 Coils Coil 705 725 - -
Blo13g00651 1396 MobiDBLite consensus disorder prediction 1255 1289 - -
Blo13g00651 1396 Pfam CFA20 domain 97 264 IPR007714 -
Blo13g00651 1396 Pfam Retinoblastoma-associated protein B domain 1117 1244 IPR002719 GO:0005634|GO:0051726
Blo13g00651 1396 Pfam Retinoblastoma-associated protein A domain 792 993 IPR002720 GO:0005634|GO:0051726
Blo13g00651 1396 SUPERFAMILY Cyclin-like 800 995 IPR036915 -
Blo13g00651 1396 MobiDBLite consensus disorder prediction 1259 1274 - -
Blo13g00651 1396 SMART RB_A_2 792 993 IPR002720 GO:0005634|GO:0051726
Blo13g00651 1396 SUPERFAMILY Cyclin-like 1115 1284 IPR036915 -
Blo13g00651 1396 Coils Coil 644 668 - -
Blo13g00651 1396 Pfam PAT complex subunit Asterix 270 352 IPR005351 GO:0030176|GO:0044183|GO:0045048
Blo13g00651 1396 Pfam Domain of unknown function (DUF3452) 472 610 IPR024599 -
Blo13g00651 1396 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 395 1383 IPR028309 GO:0006357|GO:0051726
Blo13g00651 1396 PANTHER BNACNNG22930D PROTEIN 395 1383 - -
Blo13g00651 1396 SMART DUF3452_2 462 610 IPR024599 -
Blo13g00651 1396 Gene3D - 795 983 - -
Blo13g00651 1396 Gene3D - 1081 1270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00651 Blo-Chr13:29149066 Blo07g00994 Blo-Chr7:29453608 1.33E-08 dispersed
Blo13g00651 Blo-Chr13:29149066 Blo12g00389 Blo-Chr12:20596944 2.11E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13162 PF01858 RB_A 2.70E-63 CL0065 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00651 K04681 - csv:101219810 1582.77