Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00664 ATGCCTACTCCAATACAAACAACGGCTCCGCAAGGAGAAGCTCCATTTACAGAGGGGTCACCAGGCCAGTCTCTTTCTCCCTCTCTCTCCTCCACCATTTCCTCTCTCCACTCCCTCTGCATGTCTAACATTCTGACGATGATCTGCAGGCACAGATGGACTGGGAGATTTGAAGCTCACCTCTGGGATAAAAGCTCTTGGAACAACATTCAGAACAAGAAAGGACGACAAGGGGCATATGACAATGAGGTGGCAGCAGCACGTACCTACGATCTTGCTGCTCTCAAGTACTGGGGCCCACACACAACCCTAAATTTCCCGGTGGAAACGTACGAAAAGGAAGTGGCGGAAATGGAGAAGGTGAGCAAAGAAGAGTACTTGGCTTCGCTGAGGAGGCAGAGCAGCGGCTTCTCTAGAGGTGTCTCAAAGTACAGAGGAGTTGCCAGCAGGCACCATCATAATGGACGGTGGGAGGCCAGAATTGGAAGAGTCTTAGGCAGCAAATACCTCTACTTAGGAACTTACAACACCCAAGAGGAAGCGGCGGCAGCTTATGATATGGCGGCCATAGAGTACAGGGGAGCAAATGCAGTGACGAATTTCGATATCAGCCGCTACATCGACCGCCTGAACGTCAAAATCTTTCCTGCGGCCAAGACCCAACTGCGAGAAGAGGAAGAGGAAGAGGAAGGGGAAGAAGGCGAAGTAGAACAGCAAGTGAAAAAGCAGGAAGAGAAAGAAGAGAAGAGCCATGAAATCAAGTTGTCGGAGGAGCAGAGCTCTGCAGTGGCGTTGGGGATGGAGCCGGTGGAGGACGACGACCTAGGAAGCCTACAATGGTGTTTCTTAGATTCGGCTTTCAGTTTGTTTCCTGTTCCTGATCTGCCATTGGAGAACCCTAGCGAGCTACCCGACTTGTTCGGCGACATAGGGTTTGAGGAGAACATCGACTTGATATTCGACGGAGGCTACAGCGGGAGCAACTGTTGTGCAGAGGAAGTGGGCGGGTCTGGGAGAGTGGAGGAAAGCGGCGGTGAAGAGAAGAGAAGGTTGTCTGTCTCGCCGTCATCTTCTACGATCACTTCGGTGGGTGGTTTCTTCTGA 1104 51.72 MPTPIQTTAPQGEAPFTEGSPGQSLSPSLSSTISSLHSLCMSNILTMICRHRWTGRFEAHLWDKSSWNNIQNKKGRQGAYDNEVAAARTYDLAALKYWGPHTTLNFPVETYEKEVAEMEKVSKEEYLASLRRQSSGFSRGVSKYRGVASRHHHNGRWEARIGRVLGSKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISRYIDRLNVKIFPAAKTQLREEEEEEEGEEGEVEQQVKKQEEKEEKSHEIKLSEEQSSAVALGMEPVEDDDLGSLQWCFLDSAFSLFPVPDLPLENPSELPDLFGDIGFEENIDLIFDGGYSGSNCCAEEVGGSGRVEESGGEEKRRLSVSPSSSTITSVGGFF 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 29354800 29357085 - BLOR19716 Blo13g00664 69059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00664 367 SUPERFAMILY DNA-binding domain 49 109 IPR016177 GO:0003677
Blo13g00664 367 ProSiteProfiles AP2/ERF domain profile. 44 107 IPR001471 GO:0003700|GO:0006355
Blo13g00664 367 MobiDBLite consensus disorder prediction 335 367 - -
Blo13g00664 367 CDD AP2 50 108 IPR001471 GO:0003700|GO:0006355
Blo13g00664 367 SMART rav1_2 143 208 IPR001471 GO:0003700|GO:0006355
Blo13g00664 367 SMART rav1_2 48 113 IPR001471 GO:0003700|GO:0006355
Blo13g00664 367 MobiDBLite consensus disorder prediction 1 28 - -
Blo13g00664 367 MobiDBLite consensus disorder prediction 235 256 - -
Blo13g00664 367 MobiDBLite consensus disorder prediction 223 261 - -
Blo13g00664 367 CDD AP2 142 204 IPR001471 GO:0003700|GO:0006355
Blo13g00664 367 Gene3D AP2/ERF domain 47 109 IPR036955 GO:0003700|GO:0006355
Blo13g00664 367 Gene3D AP2/ERF domain 142 204 IPR036955 GO:0003700|GO:0006355
Blo13g00664 367 Coils Coil 219 246 - -
Blo13g00664 367 MobiDBLite consensus disorder prediction 350 367 - -
Blo13g00664 367 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 48 269 - -
Blo13g00664 367 SUPERFAMILY DNA-binding domain 142 204 IPR016177 GO:0003677
Blo13g00664 367 ProSiteProfiles AP2/ERF domain profile. 143 202 IPR001471 GO:0003700|GO:0006355
Blo13g00664 367 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 48 269 - -
Blo13g00664 367 Pfam AP2 domain 142 194 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00664 Blo-Chr13:29354800 Blo17g00353 Blo-Chr17:3726507 1.01E-86 dispersed
Blo13g00664 Blo-Chr13:29354800 Blo01g00418 Blo-Chr1:4714030 6.93E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13163 PF00847 AP2 1.30E-10 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00664 - - rcu:8283400 367.466