Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00675 ATGGCTGAACATTCCGAAACAGATAGGAACATTGAGCTGTGGAAGATGAAGAAGTTGATCAAGGCACTTGAAGCGGCAGAAGGAAATGGAACCAGTATGATCTCTCTGGTCATATCTCCCCGCGATCAAATATCTCGAATTACTAAGATGCTGGCAGATGAACATGGAACGGCTTCAAACATTAAAAGCCGGGTGAATCGACAATCTGTCTTGGGTGCCATTAAGTCTGCTCAGCAGCGGCTCAAGCTGTACAACAAGGTTCCAAAAAATGGACTGGTGGTCTATGCAGGCAATGTCATAACTGAAGATGGGAAGGAAAAGATGGTCATATTTGATCTCTCACCCATGAAGCCCATTAACGCATCCCTATATGTCTGTGATAAGAGGTTTCATACAGAAGTATTGACTGAACTTCTACAATCTGATGATAAGTATGGATTTATTATTATGGATGGTAGAGGCGCCCTTTATGGAACTTTAAGTGGGAATTCTAGAGAAGTGCTTTACAAATTCTCAGTTGATCTACCGAAGAAGCACGGCAGAGGAGGACAATCAGCACTTAGGTTTGATCGTCTGCGGGTCGAAAGTCGTCATAACTACACCTCAAAGACAGCGGAGAAAGCCACTGAGTTATTCATTGATCCTGCAACTAACTTGCCTAATGTTGCTGGCCTGATCCTAGCTGGCTCCGCTGACCTTAAGGCTCAGCTTATGCAGTGCGTTTGA 726 44.21 MAEHSETDRNIELWKMKKLIKALEAAEGNGTSMISLVISPRDQISRITKMLADEHGTASNIKSRVNRQSVLGAIKSAQQRLKLYNKVPKNGLVVYAGNVITEDGKEKMVIFDLSPMKPINASLYVCDKRFHTEVLTELLQSDDKYGFIIMDGRGALYGTLSGNSREVLYKFSVDLPKKHGRGGQSALRFDRLRVESRHNYTSKTAEKATELFIDPATNLPNVAGLILAGSADLKAQLMQCV 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 29492350 29493075 + BLOR19727 Blo13g00675 69070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00675 241 Gene3D eRF1 domain 2 136 241 IPR042226 -
Blo13g00675 241 SMART eRF1_1_2 4 140 IPR005140 -
Blo13g00675 241 Pfam eRF1 domain 2 144 239 IPR005141 -
Blo13g00675 241 Gene3D eRF1 domain 1 1 135 IPR024049 -
Blo13g00675 241 SUPERFAMILY Translational machinery components 142 238 - -
Blo13g00675 241 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 239 - -
Blo13g00675 241 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 13 238 IPR004403 GO:0003747|GO:0006415
Blo13g00675 241 Pfam eRF1 domain 1 18 138 IPR005140 -
Blo13g00675 241 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Blo13g00675 241 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 239 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00642 Blo-Chr8:25132152 Blo13g00675 Blo-Chr13:29492350 3.68E-136 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00675 K03265 - jre:109001905 379.022