Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00704 ATGTTGAATCTACAATTTAAGAACCAAGCTAACCCCTCTTGTCTCACCGGTAACCCAATCGATGACTGCTGGCGGTGCGACCAAAACTGGCGAACAAACCGGCAAAGGCTCGCCGACTGCGGCATTGGGTTCGGCCAAGACGCCATGGGAGGAAAAGGCGGCCAGATCTACACGGTCACCGACTCTTCAGATTCAAATCCAGCGAACCCCACTCCGGGAACTCTACGGTACGCTGTCATCCAAGATGAACCCCTCTGGATCATCTTCTCCGCCGACATGACCATCAACCTAAAACACGAGCTCATCTTCAACAGCTTCAAAACCGTCGATGGCCGCGGCGCCAAAGTTCACATCACCGGTGGCGGGTGCATCACCCTTCAGTACGTCTCAAACGTAATAATCCACAACATCAACATCCACCATTGTAGGCCAACTGGAAATACCAACATACGGTCGAGTCCAACCCAAACCCAGCACCGTGGCAAATCAGACGGCGACGGCATCTCCATTTTCGGATCGCGCAAAATCTGGATCGACCATTGCTCACTCTCCTACTGCAAAGACGGTCTGATCGACGCAATAATGGGGTCCACCGCAATAACAATATCGAACAATTATTTCTCGCATCATGATGAGGTAATGCTATTGGGCCACAACGATAAGTATGAACCAGATTCTGGGATGCAGGTGACCATAGCTTTTAATCACTTCGGTGTAGCGCTGGTGCAACGTATGCCTCGGTGTAGACGAGGGTACATACACGTGGTGAATAATGATTTCACAGAGTGGGAGATGTATGCTATCGGCGGTAGTGCCAACCCTACCATAAACAGTCAGGGGAATCGATACACTGCTCCGGGTGACACTAATGCCAAAGAGGTCAAAAGATTACCTTTTTAG 900 50.33 MLNLQFKNQANPSCLTGNPIDDCWRCDQNWRTNRQRLADCGIGFGQDAMGGKGGQIYTVTDSSDSNPANPTPGTLRYAVIQDEPLWIIFSADMTINLKHELIFNSFKTVDGRGAKVHITGGGCITLQYVSNVIIHNINIHHCRPTGNTNIRSSPTQTQHRGKSDGDGISIFGSRKIWIDHCSLSYCKDGLIDAIMGSTAITISNNYFSHHDEVMLLGHNDKYEPDSGMQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTEWEMYAIGGSANPTINSQGNRYTAPGDTNAKEVKRLPF 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 29814282 29815181 + BLOR19756 Blo13g00704 69099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00704 299 Gene3D - 17 298 IPR012334 -
Blo13g00704 299 PANTHER PECTATE LYASE 18-RELATED 4 296 IPR045032 GO:0030570
Blo13g00704 299 Pfam Pectate lyase 100 281 IPR002022 -
Blo13g00704 299 PANTHER PECTATE LYASE 4 296 - -
Blo13g00704 299 PRINTS Pollen allergen Amb family signature 164 185 IPR018082 -
Blo13g00704 299 PRINTS Pollen allergen Amb family signature 40 57 IPR018082 -
Blo13g00704 299 PRINTS Pollen allergen Amb family signature 64 89 IPR018082 -
Blo13g00704 299 PRINTS Pollen allergen Amb family signature 266 285 IPR018082 -
Blo13g00704 299 PRINTS Pollen allergen Amb family signature 100 116 IPR018082 -
Blo13g00704 299 PRINTS Pollen allergen Amb family signature 244 263 IPR018082 -
Blo13g00704 299 SUPERFAMILY Pectin lyase-like 9 294 IPR011050 -
Blo13g00704 299 SMART amb_all 92 289 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00704 Blo-Chr13:29814282 Blo12g00487 Blo-Chr12:22639241 1.17E-165 dispersed
Blo13g00704 Blo-Chr13:29814282 Blo04g00057 Blo-Chr4:481433 0 wgd
Blo13g00704 Blo-Chr13:29814282 Blo04g00340 Blo-Chr4:2674877 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00704 K01728 - csv:101205739 513.072