Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00730 ATGGGAAAGAGAGGAAGTTGGTTTTGCGCAGTGACAAAAGTTCTGGGTTCTGAACCGAAGGAAAAGAAAGATCAGAAAACCCAGAAAACGAAGAGAAAATGGTTTGGAAAGAATAAGAAAACAGATGTGATTACTTTTTTGGAAGAAACAGCTCCACTGCCTCTTCTTCCTTCGCCACTTCCTGCTCTAGAAGACGTGAAATTGACAGGTGTTGAGAATGAACAAAGCAAGCACGCCTACTCTGTGGCACTTGCCACCGCAGCTGCAGCAGAGGCTGCTGTGGCGGCGGCTCGGGCAGCGGCCGAGGTTGTTCGTCTGACCACAATTCCTCGTTTCGTGGGAAAATCAAAAGACGAAATAGCAGCCATCAAAATTCAAACAGCATTTCGTGGATATTTGGCGAGAAGAGCTTTGCGAGCATTAAGAGGGCTCGTCCGGTTGAAAATGTTGATGGAAGGGCCATCTGTAAAACGGCAAGTGGCTTCCTCGTTGAGATGCATGCAGACTCTCGCACGTTTGCAATCGCAGATCCGTTCGAGGAGGCTTAGAATGTCTGAGGAGAACCGGGCTCTTCAGCATCAACTTCAGCGGAAACACGAAAAAGAACTTGCAAAATTAAGAGCTTCTATTGGTGAAGAATGGGACGATAGAACACAGTCAAAGGAGCAAGTTGAAGCCAAAGTACTCAACAAGCAAGAAGCTGCCTTGAGAAGAGAAAGGGCTCTGGCCTATGCTTTCTCTCACCAGCAAACTTGGAAGAACTCTTCGAAATCGGCAAACCAAACGTTCATGGATCCGATCAACCCTCATTGGGGTTGGAGCTGGTTGGAGCGATGGATGGCTTCTCGGCCATGGGAGGCTAAAAACGTAATTGATTACAACGATCATACGACTCCAAACCACGGGGCTTCTATTGGAGATGTCAACCAAGTGTATACCCGTCGAGATCTCAACCTCGAACTAAAGAATTCCCTATGGACTCCGCCTACCCAAAAGTCGAGCAGGCCTCCAAGCCGCCAGTCCCCATCGACTCCTTCAAAGGCACTGCCTTCTTCGTCTCTGTCGAGGAAAATAAAGCCGTCCAGCCCGAGATGGGTTGGAGACAACGACTCTAGAAGTGTGTATAGTGTCACTTCGGAAAGGTGCCGGAGACACAGCATTGCAGGGTCGTCAGTCAGAGACGACGAAAGTCTAGTCAGCTCGGCTTCGGTTCCAAGCTATATGGGATCCACGGAGTCCACAAAGGCAAAGACTCGATTTGCAAGCCCTGCCGGAGTGGACAAAGCCAATACACCGGAGAAGGAATCAGCTACTTATGTGAAGAAGAGGTTGTCTTTCTCGTCGTCCCCAGCCCCACCGAGGAGGTATTCCGGCCCTCCGGAGATCAATACGAGCACTAGAGAATTGAATAAAAGATGTGTTTGTTTGGAGAAAATGAGTGTTTTTTCATCACTTCTAACATGGTTTTCTGCTAATCCATTAATTCCACTGTTGTTGCCAGTGTTTGTGTTAGTGTGTATGATTCATTTACACCAGGGTACACCTTTTCTGGCTGGCCTTGCAGTAGCAGCTGCAGCTCTTGCTGGCCGATATGGTATACAGGCTTGGCAATCATTCAAGAATCAGCCACCAAAACTACGCAAATTCTATGAAGGCGGATTTCAGCCCACAATGACAAGAAGAGAAGCAGCTCTTATTCTCGGTGTAAGAGAGAATGCAACTCCAGACAAGGTTAAGGAAGCACATAAAAAGGTAATGGTGGCAAACCACCCAGATGCTGGCGGAAGCCATTATCTTGCCTCCAAGATCAACGAAGCTAAAGATTTGATGCTCAGAAAAACCAAAGGCAATGGATCAGCATTTTGA 1866 47.7 MGKRGSWFCAVTKVLGSEPKEKKDQKTQKTKRKWFGKNKKTDVITFLEETAPLPLLPSPLPALEDVKLTGVENEQSKHAYSVALATAAAAEAAVAAARAAAEVVRLTTIPRFVGKSKDEIAAIKIQTAFRGYLARRALRALRGLVRLKMLMEGPSVKRQVASSLRCMQTLARLQSQIRSRRLRMSEENRALQHQLQRKHEKELAKLRASIGEEWDDRTQSKEQVEAKVLNKQEAALRRERALAYAFSHQQTWKNSSKSANQTFMDPINPHWGWSWLERWMASRPWEAKNVIDYNDHTTPNHGASIGDVNQVYTRRDLNLELKNSLWTPPTQKSSRPPSRQSPSTPSKALPSSSLSRKIKPSSPRWVGDNDSRSVYSVTSERCRRHSIAGSSVRDDESLVSSASVPSYMGSTESTKAKTRFASPAGVDKANTPEKESATYVKKRLSFSSSPAPPRRYSGPPEINTSTRELNKRCVCLEKMSVFSSLLTWFSANPLIPLLLPVFVLVCMIHLHQGTPFLAGLAVAAAALAGRYGIQAWQSFKNQPPKLRKFYEGGFQPTMTRREAALILGVRENATPDKVKEAHKKVMVANHPDAGGSHYLASKINEAKDLMLRKTKGNGSAF 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30127523 30131772 + BLOR19782 Blo13g00730 69125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00730 621 PANTHER IQ-DOMAIN 5-RELATED 1 466 - -
Blo13g00730 621 CDD DnaJ 566 608 IPR001623 -
Blo13g00730 621 MobiDBLite consensus disorder prediction 393 418 - -
Blo13g00730 621 SUPERFAMILY Chaperone J-domain 552 613 IPR036869 -
Blo13g00730 621 MobiDBLite consensus disorder prediction 323 359 - -
Blo13g00730 621 ProSiteProfiles dnaJ domain profile. 562 615 IPR001623 -
Blo13g00730 621 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Blo13g00730 621 Gene3D - 31 144 - -
Blo13g00730 621 MobiDBLite consensus disorder prediction 322 463 - -
Blo13g00730 621 SMART dnaj_3 561 615 IPR001623 -
Blo13g00730 621 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 466 - -
Blo13g00730 621 Gene3D DnaJ domain 548 615 IPR036869 -
Blo13g00730 621 SMART iq_5 117 139 IPR000048 GO:0005515
Blo13g00730 621 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00915 Blo13g00730 CCT
Blo13g00915 Blo13g00730 ECH
Blo13g00730 Blo13g00915 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01409 Blo-Chr7:34116855 Blo13g00730 Blo-Chr13:30127523 1.09E-92 dispersed
Blo09g00025 Blo-Chr9:290840 Blo13g00730 Blo-Chr13:30127523 2.66E-27 dispersed
Blo09g00550 Blo-Chr9:16793475 Blo13g00730 Blo-Chr13:30127523 2.63E-139 dispersed
Blo13g00730 Blo-Chr13:30127523 Blo16g00006 Blo-Chr16:433825 7.38E-36 dispersed
Blo07g00960 Blo-Chr7:28965953 Blo13g00730 Blo-Chr13:30127523 2.51E-27 transposed
Blo12g00460 Blo-Chr12:22154907 Blo13g00730 Blo-Chr13:30127523 1.70E-48 wgd
Blo13g00730 Blo-Chr13:30127523 Blo13g00915 Blo-Chr13:31675462 9.24E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00730 - - vvi:100256490 531.176