Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00740 ATGTGGGATTGTGCCCCCCTAATATGGGTCGGACCCACAACTGGGCCTTTCCTGGCCTTCACAAGGCGAGATGCCACAATCTCCCCCCCTTGGGGACCCGACGTCCTCGTCGGCCACACTTCTGGTTGGGATTTCGCTCTGATACCATTTGTAACGTCCCCCGGTGCTCCTAGTACAATATTGTCCGCTTTGGGCCGAAGCCCGCACGGGTTTGTTCTTGGGGTTAGCCTAAAACGCGTTGTACTAGGTCAGAAACTCAACCGGCAAGCGAGAAGGAGGAACGGGATGTTGGATCTTAACTTCTATGTTACCCATAGTGATTCAATGGAGGAGCACAATTTCCCTGCTAATTCTGCTACCCAACTAGAAGATTCAGGCACTTCCGATTCCTCGATTGTTAATGCGGAAGAAACTGCTGCTCCAAGCGATTATGGAAAAGATGAAGACTCTTCTAACACCGCCACTGGATTCATTTTCGACATCATGAGAAAACGGAAAGAAAGTGACGGCGCGAATTGGGTAGTGGATGAAAACGCATCGTCGGAACTTGAAACGCAGCCGCTTTTTCCAGTCGCAGGAAACGGGAGAGACTGGGATTCGGAGCTTCGTTTGGGGTTATCCACCTTAGAGAGATCTTCGTGGCTAAACTTGTCGTTCTCCGACTCCGGTGGCGGAGCAAAGGAGGTCAAAAGTCCTCAGCAAAAGAAACAGCTTGTGAGGAAAAGTCGGCGAGGTCCACGCTCCCGGAGCTCTCAGTACCGTGGCGTCACTTTTTACAGGCGAACCGGCCGCTGGGAATCACATATATGGGATTGTGGGAAGCAAGTGTACTTAGGTGGATTTGACACTGCTCATGCGGCAGCAAGAGCATATGATAGAGCTGCAATTAGATTCAGAGGAACAGACGCTGATATTAATTTCAACACCAGCGATTATGAAGAAGATATAAAACAGACGAAGAACTTGACGAAGGAGGAATTCGTGTACATTCTTCGTCGCCATTGCAGCAGATTTTCTCGAGGAAGCTCGAATATTCAAGCCTCTACGCTTCGCAGGCGTGGGCAATGGGAGAATGGCGACAATCTTGATCTGAGTCTTGGGATGTCAAAAAATGCAGAAGTTTTAATTGGAAACGAGAGAATGGGCTTCATGGATTCGCCATTTTCATCGATCATACCTAAATTGGTAAAAACGCTGTCGTTTCTTTGA 1209 48.8 MWDCAPLIWVGPTTGPFLAFTRRDATISPPWGPDVLVGHTSGWDFALIPFVTSPGAPSTILSALGRSPHGFVLGVSLKRVVLGQKLNRQARRRNGMLDLNFYVTHSDSMEEHNFPANSATQLEDSGTSDSSIVNAEETAAPSDYGKDEDSSNTATGFIFDIMRKRKESDGANWVVDENASSELETQPLFPVAGNGRDWDSELRLGLSTLERSSWLNLSFSDSGGGAKEVKSPQQKKQLVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIRFRGTDADINFNTSDYEEDIKQTKNLTKEEFVYILRRHCSRFSRGSSNIQASTLRRRGQWENGDNLDLSLGMSKNAEVLIGNERMGFMDSPFSSIIPKLVKTLSFL 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30192999 30196604 - BLOR19792 Blo13g00740 69135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00740 402 MobiDBLite consensus disorder prediction 221 253 - -
Blo13g00740 402 SUPERFAMILY DNA-binding domain 251 309 IPR016177 GO:0003677
Blo13g00740 402 ProSiteProfiles AP2/ERF domain profile. 252 308 IPR001471 GO:0003700|GO:0006355
Blo13g00740 402 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 96 358 - -
Blo13g00740 402 SMART rav1_2 252 314 IPR001471 GO:0003700|GO:0006355
Blo13g00740 402 Gene3D AP2/ERF domain 251 310 IPR036955 GO:0003700|GO:0006355
Blo13g00740 402 MobiDBLite consensus disorder prediction 112 131 - -
Blo13g00740 402 Pfam AP2 domain 252 300 IPR001471 GO:0003700|GO:0006355
Blo13g00740 402 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 96 358 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00306 Blo-Chr4:2399021 Blo13g00740 Blo-Chr13:30192999 9.92E-122 dispersed
Blo13g00740 Blo-Chr13:30192999 Blo13g01099 Blo-Chr13:33141228 1.39E-56 dispersed
Blo13g00607 Blo-Chr13:28491397 Blo13g00740 Blo-Chr13:30192999 1.00E-40 transposed
Blo13g00740 Blo-Chr13:30192999 Blo14g00149 Blo-Chr14:1129907 3.03E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13171 PF00847 AP2 5.50E-10 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00740 K09284 - jre:109002995 272.707