Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00743 ATGGCGACCATACCATCCTCATTCATTCTCTCCAGCTCTTTTCCTCTCGCAACGCCTCCTCTTAAACCACACACGTCGAAACCCCATCTCACCTTCACAACCCGCGCAACCGACCCCGAATCGCCTCCCTCTGAACCCTCCTCGCCGGAATCCCAAACCGCGGCTGATTCTAGCGCGGACGACTTCGAAAACCGCCTCTCCCAGGTCCGACTCAGGTACCGCAGCGGAACTGGCAAAAAAGCTGAGCAACGAAAGGTCCGGAAGTCCAAAACAGGATCACCCTCCGGATCTGGCTCCGGCTCCAACTCGTCGATGTATCTCCCCGCAGTGCCGCTGAAGGAACCGGTTGCCGGCGGATTGAAGGTGAATTTCGGATTCAGTCCGTACAGCGAGAAGATAAACGGAAGCATAGCAATGATTGGGCTATCGGCACTGCTATTGGTGGAGCTTGCTACTGTGAACGAATCAAAGGATTCCGGAGAGACAACTCCGGCGACAGCAGCTCTGGATCCAATTCCGGCGAGTAAACAGAACACGATTCTGTTCTGTTCCGTTGGTTTGTTCGCGCACTCGATATCTCTACGTAATGTCTTACACTTGGATGAATTAATGTTGTCCGCGTTAATCAATGAGTATTTGATTTCTGGAACCTGTGAATTCTATACTTTCATGAAGATCGTATCGCCCTGCTGGAGACCTTCTGTTGAGGGTGAAAATTCCAGTAGAGGCGGAGACTCAAACCGTGGGAGGGTTGATGGGTTACTGTGGTACAAAGATTCTGGACGACACATGAATGGGGAATTCTCCATGGCAGTAATTCAAGCGAACAACTTACTGGAAGATCATAGCCAACTTGAATCAGGGCCAGTAAGCCTCTCTGAATCAGGTCCTCAAGGAACATTTGTTGGTATTTACGATGGCCACGGAGGTCCAGAAGCTGCACAGTTCGTAAATGATCATCTTTTTAACTATATCAGGACTATTCATGGTGCAGAGCTAACATCAGAAAATCGAGGATTATCTGCCGACGTTATTAACAAGGCATTCTTGGCAACAGAAGAAGAATTCTTATCTCTCGTGAAGAAGCAATGGGCCGAAAAACCACAGATTGCTTCTGTGGGTTCATGTTGTTTGGTGGGTATAATATGTGGTGGGTTTCTATACATTGCAAATGCAGGAGATTCTCGGGTGGTGTTAGGAAGACTCGAGAAAACTGTTAAAGAAGTTAAAGCCATTCAATTATCAACAGAGCACAATGCTAGCATGGAATCTGTGAGAGAGGAGTTACGCTCTATGCATCCCGATGATCCACACATTGTGGTTTTGAAGCACAAGGTTTGGCGTGTGAAGGGTTTAATTCAGATGGAGTTTTTTAATATGATTTCTTCTTTAATATCTTTATTTCTTCTTACTGCTAGCACATATTTTTTTGTACATAATAAGGCCTATGACATTCTTCCATTTTTTCTGTCTCATTGGAAAAAACAAGGTTGTCCAAAACATTGTTTTAATTTATGTGTATATATTTTGTCCAAAAGAATTGTGGCCATAGTCACTCTTTTGGTTAGCTATAAACTGACTGTTGTTTCTAGATCTATTGGTGACGCATATTTGAAGAAGGCGGAGTTCAATCGAGAGCCTTTATTGTCTAAGTTCAGATTGCCCAAGCCATTCGAGAAGCCGATTCTTAAAGCTGAGCCCACAATCTCTGTTGAGAAGCTTTATCCCGAGGATCAGTTTTTAATCTTTGCATCAGATGGCTTGTGGGAGTATCTAACCAATCAAGAGGCCGTTGATATTGTGCAGAGCTGCCCCCGTAATGGAATTGCAAGAAAACTAGTGAAAGCAGCACTGTGTGAAGCAGCGAAGAAGAGAGAAATGAGATACTCAGATTTGAAGAAGATAGATAGAGGAGTGAGAAGACATTTTCATGACGACATAACAGTCATCGTGGTGTTCCTTGATTCCCACCTCATCACCAGGAGCTCATGGCGTGGCCCTCTGCTTTCAATCAGATGGGGAAGTGGAGTTTCTGTCGAATCTTAG 2046 45.11 MATIPSSFILSSSFPLATPPLKPHTSKPHLTFTTRATDPESPPSEPSSPESQTAADSSADDFENRLSQVRLRYRSGTGKKAEQRKVRKSKTGSPSGSGSGSNSSMYLPAVPLKEPVAGGLKVNFGFSPYSEKINGSIAMIGLSALLLVELATVNESKDSGETTPATAALDPIPASKQNTILFCSVGLFAHSISLRNVLHLDELMLSALINEYLISGTCEFYTFMKIVSPCWRPSVEGENSSRGGDSNRGRVDGLLWYKDSGRHMNGEFSMAVIQANNLLEDHSQLESGPVSLSESGPQGTFVGIYDGHGGPEAAQFVNDHLFNYIRTIHGAELTSENRGLSADVINKAFLATEEEFLSLVKKQWAEKPQIASVGSCCLVGIICGGFLYIANAGDSRVVLGRLEKTVKEVKAIQLSTEHNASMESVREELRSMHPDDPHIVVLKHKVWRVKGLIQMEFFNMISSLISLFLLTASTYFFVHNKAYDILPFFLSHWKKQGCPKHCFNLCVYILSKRIVAIVTLLVSYKLTVVSRSIGDAYLKKAEFNREPLLSKFRLPKPFEKPILKAEPTISVEKLYPEDQFLIFASDGLWEYLTNQEAVDIVQSCPRNGIARKLVKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLITRSSWRGPLLSIRWGSGVSVES 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30209293 30218159 - BLOR19795 Blo13g00743 69138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00743 681 Pfam Protein phosphatase 2C 529 621 IPR001932 -
Blo13g00743 681 Pfam Protein phosphatase 2C 297 423 IPR001932 -
Blo13g00743 681 SMART PP2C_4 261 652 IPR001932 -
Blo13g00743 681 MobiDBLite consensus disorder prediction 27 62 - -
Blo13g00743 681 ProSiteProfiles PPM-type phosphatase domain profile. 267 654 IPR001932 -
Blo13g00743 681 MobiDBLite consensus disorder prediction 1 106 - -
Blo13g00743 681 MobiDBLite consensus disorder prediction 90 106 - -
Blo13g00743 681 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 528 676 - -
Blo13g00743 681 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 225 455 - -
Blo13g00743 681 CDD PP2Cc 268 654 IPR001932 -
Blo13g00743 681 ProSitePatterns PPM-type phosphatase domain signature. 301 309 IPR000222 GO:0043169
Blo13g00743 681 Gene3D - 257 663 IPR036457 -
Blo13g00743 681 PANTHER ALPHABET, ISOFORM E-RELATED 528 676 - -
Blo13g00743 681 PANTHER ALPHABET, ISOFORM E-RELATED 225 455 - -
Blo13g00743 681 SUPERFAMILY PP2C-like 296 655 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00743 Blo-Chr13:30209293 Blo15g00384 Blo-Chr15:5408640 3.43E-68 dispersed
Blo12g00610 Blo-Chr12:24398189 Blo13g00743 Blo-Chr13:30209293 7.02E-132 transposed
Blo13g00743 Blo-Chr13:30209293 Blo04g00301 Blo-Chr4:2349978 5.22E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00743 K01102 - rcu:8264804 400.979