Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00766 ATGAAGGCTATGGCAGCCATATTTACAGTGTTCGTTCTAAGTGGTGTTGTTCTAACGCTTGTTGATGCCAGAATTCCCGGAGTTTACAGCGGAGGAGATTGGCAGAGCGCCCACGCTACTTTTTACGGCGGAAGTGACGCCTCTGGAACAATGGGAGGGGCGTGTGGGTATGGAAACTTGTATAGCCAAGGCTACGGCGCGAGCACGGCGGCGCTAAGCACGGCACTCTTCAACAATGGTATGAGCTGCGGCGCTTGCTTCGAGATCAAGTGCGCGAGCGACCCGAAATGGTGCCACTCAGGAAGCCCGTCGATCTTGATCACAGCCACCAATTTCTGCCCTCCAAACTACGCTCTTCCCAGCGATAATGGCGGCTGGTGCAATCCTCCTCGCCCACACTTCGACCTCGCTATGCCCATGTTCCTCAAAATAGCCGAATACCGCGCCGGAATCGTCCCCGTCTCTTACCGCCGAGTGTCATGCCGAAGGCAAGGAGGTATCCGGTTTACGATCAACGGCTTCAAATACTTCAATTTAGTTCTAGTCACCAACGTCGCCGGCGCCGGCGATATCTTGAAAGTGAGCGTCAAGGGGTCCAGAACTGGGTGGATGGTCATGAGTCGGAATTGGGGCCAAAACTGGCAGTCGAACGCTATTTTGGTTGGCCAGTCACTTTCATTCAGAGTCACCGGCAGTGACCGCCGCACCTCCACTTCTTGGAACTTTGTCCCCTCGAATTGGCAGTTCGGCCAAACTTTCACCGGCAAAAATTTCAGGGTC 780 54.36 MKAMAAIFTVFVLSGVVLTLVDARIPGVYSGGDWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGASTAALSTALFNNGMSCGACFEIKCASDPKWCHSGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVSCRRQGGIRFTINGFKYFNLVLVTNVAGAGDILKVSVKGSRTGWMVMSRNWGQNWQSNAILVGQSLSFRVTGSDRRTSTSWNFVPSNWQFGQTFTGKNFRV 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30398246 30399250 - BLOR19818 Blo13g00766 69161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00766 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Blo13g00766 260 Pfam Lytic transglycolase 69 156 IPR009009 -
Blo13g00766 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
Blo13g00766 260 PANTHER EXPANSIN-A4 9 259 - -
Blo13g00766 260 SUPERFAMILY PHL pollen allergen 163 255 IPR036749 -
Blo13g00766 260 Gene3D - 22 162 IPR036908 -
Blo13g00766 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Blo13g00766 260 Gene3D - 166 258 IPR036749 -
Blo13g00766 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Blo13g00766 260 SMART dpbb_1 69 156 IPR007112 -
Blo13g00766 260 PANTHER EXPANSIN-A15 9 259 IPR002963 GO:0009664
Blo13g00766 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Blo13g00766 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Blo13g00766 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Blo13g00766 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Blo13g00766 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Blo13g00766 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Blo13g00766 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00884 Blo13g00766 CCT
Blo13g00884 Blo13g00766 ECH
Blo13g00766 Blo13g00884 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00766 Blo-Chr13:30398246 Blo13g01073 Blo-Chr13:32906708 3.68E-138 dispersed
Blo15g00413 Blo-Chr15:5885000 Blo13g00766 Blo-Chr13:30398246 1.22E-86 dispersed
Blo01g01112 Blo-Chr1:39657479 Blo13g00766 Blo-Chr13:30398246 6.79E-157 wgd
Blo12g00426 Blo-Chr12:21683742 Blo13g00766 Blo-Chr13:30398246 3.26E-134 wgd
Blo13g00766 Blo-Chr13:30398246 Blo13g00884 Blo-Chr13:31385612 1.97E-155 wgd
Blo13g00766 Blo-Chr13:30398246 Blo14g00114 Blo-Chr14:820763 1.35E-139 wgd
Blo13g00766 Blo-Chr13:30398246 Blo07g01176 Blo-Chr7:31647090 4.97E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00766 - - rcu:8261656 492.656