Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00800 ATGTCTTTTGGAGTGGCAGCTTTGATTTCACCTTCCATGAGTGGTTCTTCAACTCTGTGCAAGTCTTCGTCGCCGTCTTCTGCGTCTTCTGATTCTCCGAGAGTTTTGAGTCTAAACAACGTCCACGGATCACCACCATCGCCGTCGTCGATGGCCCTACGGCGACAGAAGCAAATGAGCGACGGCCCCAGTAATAGTATCATTTCGAAGAAGAGGCCAGCCAGATTAGCTATACCGATTGTTTCTGTTGATTTAGGAGGAGATGACGAGGCTATTGGCGAGCGAGTGGATCTGGTTGAGGTGGAAGAGGAAGGTTATTCGGTTTATTGCAAGAAGGGAAGGAGAGGACTGAGGGGAACTGCCATGGAGGATCGATACACCGCCATAGTTAATCGGCATAAAGATTGTAGACAGGCTTCCTTCTTCGGTGTTTTTGACGGTCACGGAGGATCAAAAGCAGCAGAGTTCGCAGCAAAAGAAATGGGCCAAAACTTACTTGATCGGGCAGCTAGAATAAGCGAAAAGGAAATTGAGCAAACAATCAAAGAATGCTACTTGATTACAGACAAACAGTTTTCAGAGAAGGGTGGCAGCGGCGGCACTTGCTGCGTAACTGCATTGATACGAGACGGCAATCTCGCAGTCTCCAATGCCGGAGACTGTCGCGCCGTTTTGAGCAGAAAAGGAAAGGCAGAGGCCCTCAGTTCCGACCACCGTCCATCGAGGGCCGACGAAAGATTAAGAATTGAAAACCTGGGTGGTTACGTAGACTGCCGCAATGGAGTTTGGAGAGTTCAAGGATGCCTCGGAGTGTCGAGAGGAATAGGCGACATTCACCTGAAGCAGTGGGTCATATCGGAGCCGGAGACTGTAATCATCAGGATCAGCCATGATTGTGAGTTCTTAATCCTCGCTTCCGACGGTTTATGGGACAAGGTGAGTAATGAGGAGGCAGTAGACCTGGTTCGTCCTTTATGCGTAGGCGTTGAACATCCAAAGCTACTCTCCGCCTGTAAAAAGATGGCTGAATTATCCATGGCGAGAGGCTCGACGGATGACATAAGCGTGATGATCGTCAAATTGAGGAGCTTTGTTTAA 1098 49.18 MSFGVAALISPSMSGSSTLCKSSSPSSASSDSPRVLSLNNVHGSPPSPSSMALRRQKQMSDGPSNSIISKKRPARLAIPIVSVDLGGDDEAIGERVDLVEVEEEGYSVYCKKGRRGLRGTAMEDRYTAIVNRHKDCRQASFFGVFDGHGGSKAAEFAAKEMGQNLLDRAARISEKEIEQTIKECYLITDKQFSEKGGSGGTCCVTALIRDGNLAVSNAGDCRAVLSRKGKAEALSSDHRPSRADERLRIENLGGYVDCRNGVWRVQGCLGVSRGIGDIHLKQWVISEPETVIIRISHDCEFLILASDGLWDKVSNEEAVDLVRPLCVGVEHPKLLSACKKMAELSMARGSTDDISVMIVKLRSFV 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30736880 30738249 + BLOR19852 Blo13g00800 69195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00800 365 CDD PP2Cc 105 361 IPR001932 -
Blo13g00800 365 SMART PP2C_4 98 359 IPR001932 -
Blo13g00800 365 SUPERFAMILY PP2C-like 106 362 IPR036457 -
Blo13g00800 365 SMART PP2C_SIG_2 117 361 IPR001932 -
Blo13g00800 365 MobiDBLite consensus disorder prediction 9 67 - -
Blo13g00800 365 Gene3D - 98 363 IPR036457 -
Blo13g00800 365 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Blo13g00800 365 MobiDBLite consensus disorder prediction 9 68 - -
Blo13g00800 365 Pfam Protein phosphatase 2C 122 354 IPR001932 -
Blo13g00800 365 ProSiteProfiles PPM-type phosphatase domain profile. 105 361 IPR001932 -
Blo13g00800 365 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 24 364 - -
Blo13g00800 365 PANTHER PROTEIN PHOSPHATASE 2C 24 364 IPR015655 GO:0004722|GO:0006470
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00226 Blo13g00800 CCT
Blo04g00226 Blo13g00800 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00800 Blo-Chr13:30736880 Blo17g00260 Blo-Chr17:2646590 1.44E-79 dispersed
Blo13g00800 Blo-Chr13:30736880 Blo03g01176 Blo-Chr3:38069176 4.78E-124 wgd
Blo13g00800 Blo-Chr13:30736880 Blo04g00226 Blo-Chr4:1763274 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00800 K17506 - csin:114291970 392.504