Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00804 ATGGGTGGGAATTCTCCATGCGCGTCCTGCAAGCTTTTGAGAAGACGATGCGCCAAGGAGTGTATCTTCGCCCCTTATTTTCCCTCACACGACCCTCATAAGTTCGCCATTGTTCACAAGGTTTTTGGCGCTAGCAATATCAGCAAAATGTTGCAGGAGCTTCCAGTTCATCAGAGAGCAGATGCTGTGAGCAGTCTAGTTTATGAAGCAAATGCAAGAGTGAGAGACCCAGTCTATGGGTGTGTAGGAGCTATATCTTACCTCCAAAGCCAGGTTTCTCAGCTTCAGATGGAACTTGCAGTGGCTCAAGCGGAGATTCTATGCATCCAAATGCAGCAAGAGCCGATGGCTGCTTTGCCAAGTAGCTCGCCATTAAACCCAGATGAGAAGTCTTACAGCGTTCTCCCAGACAATCTCCCTCCCTACCTCAATTTTTCCTCTTCTAATACTGTAATTCACGGCTCTCTCAAAAGGGAGAGCCTTTTCAGCCACGACATGGTTTCTTAG 507 47.73 MGGNSPCASCKLLRRRCAKECIFAPYFPSHDPHKFAIVHKVFGASNISKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMELAVAQAEILCIQMQQEPMAALPSSSPLNPDEKSYSVLPDNLPPYLNFSSSNTVIHGSLKRESLFSHDMVS 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30805934 30806530 + BLOR19856 Blo13g00804 69199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00804 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 127 - -
Blo13g00804 168 Coils Coil 85 105 - -
Blo13g00804 168 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Blo13g00804 168 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Blo13g00804 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 2 127 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00218 Blo13g00804 CCT
Blo04g00218 Blo13g00804 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01103 Blo-Chr3:37501099 Blo13g00804 Blo-Chr13:30805934 1.45E-16 dispersed
Blo03g01204 Blo-Chr3:38313917 Blo13g00804 Blo-Chr13:30805934 1.23E-67 dispersed
Blo03g01266 Blo-Chr3:38972906 Blo13g00804 Blo-Chr13:30805934 1.91E-49 dispersed
Blo04g00196 Blo-Chr4:1563536 Blo13g00804 Blo-Chr13:30805934 3.23E-46 dispersed
Blo12g00316 Blo-Chr12:18573057 Blo13g00804 Blo-Chr13:30805934 3.96E-42 dispersed
Blo13g00804 Blo-Chr13:30805934 Blo15g00606 Blo-Chr15:14709666 1.51E-55 dispersed
Blo18g00717 Blo-Chr18:17618546 Blo13g00804 Blo-Chr13:30805934 4.81E-09 dispersed
Blo13g00804 Blo-Chr13:30805934 Blo03g01196 Blo-Chr3:38213320 4.39E-46 wgd
Blo13g00804 Blo-Chr13:30805934 Blo04g00218 Blo-Chr4:1690897 4.05E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13174 PF03195 LOB 2.20E-42 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00804 - - qsu:112026683 277.715