Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00806 ATGTGTTGCGGCTCCTGGCAAGCCGTGGAGAGAATAAGAATTAAGAATGGGACTTTGACATTTCATTTGGTGGATGATCAGTTTATGGTACTCGAAAGAGGCCCCTTCTTGGACGTTCGAATCAGGTCGAGAAGGGCTAGTTTGTATGACTGTACCATCTTCTTGAGGCCTGGCATTGACATATGTGTACTCACAACTTCTGGGTTGGATTTAGAAGATTCAAAGCCGGTGTGGATCGATGCTAAAATAAGTTCTATCGAGCGGAAGCCTCATGATTACACGTGTTTATGCGAGTTTTACGTCAACTTTTATACCAACGAAAAACCACTTGGTTCAGGGAGAGGAAAACTCAGTAAAGAGTTAAATGTCGTAGGGATTGACCAAATCTCCATCCTCCAGAAGTTTCAGAAGAAATATTGCGAAGATCAGTATTACCGGTGGGACTTCTCGGAGAACTCCTCTTTGCTGCGAAAAACTAAAATACTAGTCGGAAAATTCTTATCGGATATTTCGTGGTTGATTGTTACGTCAGCGTTGAAGCAGGTTTCGTTTGATGTAAGATCAGTCGAAAACAAGATGGTTTATGAAATTTTGGGAGGTGATCTTGAAGCCCAATCATTCAATTCGGACCGATGTTTAAATATGGTAACTTTCCATGTAGAGAATGAGAAACTTGTACCATTAGTGATACGGGTTGGTTCGGATGATACGGTTGAAGACAAACCTACTTCTCAGACATATGAAAATAAAATTGTGCCTTATTATGGCGTTGTAGAGTTGCGGCGATCAAAACGCCGTAAAGTTCAACCCGATCGATATCTTGGATGCGATAAGATGGATGAACTCGAGATTGACTACAGTAAATTGAAGCCTTATCGGACTGATCAATGCGATGACGATGAAATGACGATGCCACTTTCATGTTTGTTTGGCATGAACTTATCCGGTCCGGAAGATCGAATGGTGGAGAATCGAATAAAATTTCGTTCATCTACAACAGCATCATCGGAGAAGCTCCGTTTGTTGAAGAACAATAGCAAAGCAAGGGAAATGAAATCAAGCTTCTCAGACAAAAATAAAGATAAAATGGAACTTGCTATTGTTCCTCTGCCTGAACATAATCAACTGATTGCCTTTGATAGCTATCTTCCCGGCGACAAGATGGCAAATAATTATTCGGGTCAGATTACTGAAATCTCTCCCAAATATTATTATATCAACACTTTTCGAAAAGTGAGGAGGAGAAATGTTATTCCTGATTTGGAAGATTTGGAGCTTGCAAAAACATGGGGAGGAACATCTTCAAGTACTAAACTTCAAAGGGCAAGTTATCATAATACAAGTTCGAAAGGTGATAGCAATGGCGAAGAACGAGTATACAGGAAAAGATCTCTTGGTGCTGGTGCATATAAGGATCTGATAAATTCATTTTTGAAGATGGCGGATTCGACCGCAAAAAGAGAGGGCCCACAAATCATCGATCAATGGAAAGAATTTAAGGAAAACAGCAGGTCGGATCGGAGGCAAGAGGCAGAACCACCCCCGAATGAGGACGAACAGGAAATGTCTGAGACTGAAATGCTGTGGAGAGAAATGGAGTTGTCTCTTGCTTCGAGTTATCTTTCTGAAGATTACCAGGTTCCGAATGCTGGATTCTCCACTGATATGGAGAAGGGATCGAGCAATGAATGTTGTCATGAATACATTTTAAACGAAGAACTCGGGATTTTGTGTCACATATGTGGATTCGTCAGCACCGAAATAAAAAATGTTACATCCCCATTTATGCAATACACTAGCTGGAACACGGAAGAAAAGCCGTTGACGGAGAATAATGCATATCGGGAGGCTGATGAAGGGGAATTTGATGTTTCCCATGGAAGTGATTTGTCAGACCCTTCTGTCATCGAAGAAAACGAAAATGTCTGGGCGTTGATCCCTGAACTTAGACGAAAACTTCACCTCCATCAGAGAAAAGCTTTCGAATTTCTATGGCAAAACATTGCTGGTTCCATTAACCCTGCAATGATGAAATTGGCTTCGAAGAAGATAGGCGGTTGTGTGGTGTCCCACTCTCCCGGAGCCGGAAAAACTTTTCTCATCATTGCATTTCTCGTAAGCTACTTGAAGCTATTCCCCGGGAAAAGACCTTTGGTTCTTGCCCCGAAGACGACTCTCTATACTTGGTACAAAGAATTCATCAAGTGGGAGATTCCGGTTCCTGTCCATCTAATTCATGGCCGGCGAAGCTATCGAATTTTTAGACCGAAAAGTGTGTCATTTCCGGGATTCGGGAAGCCTACGGATGATGTGATGCATATCTTAGATTGCTTGGAAAAAATTCAGAAGTGGCATGCACATCCAAGCGTTCTCGTCATGGGTTATACATCGTTTTTGACATTAATGCGGGACGATTCGGCATTTCCACACAGAAAGTTCATGTCTCGAGTTTTGCGTGAAAGTCCGGGAATTCTGATATTAGACGAGGGGCACAACCCGAGAAGTACTAAATCAAGGTTGAGGAAAGGTCTGATGAAAATTCACACTGATCTGAGAATATTGCTATCGGGTACGTTGTTTCAAAACAATTTCGGCGAATATTTCAATACGTTGTGCTTGGCAAGACCAAGATTTGTGAAGGAAGTGCTGAAAGAATTAGACCCCAAGTACAGGAGGAAAAACAAGAGTGTGAAGAAAGCGTGGAGCTTGCAAGAGGCAAGAGCGAGAAAATTCTTCTTAGACAACATAGCGAAGAAAATTGATTCGGATGTGGGAGAAGACCGGATGAAAGGTCTGAACATGTTGAGAAGTTTGACGAATGGTTTTATCGACGTTTATGAAGGCGGAAACGCCGAATGCCTTCCCGGCCTGCAAATCTACACTTTGTTGATGAACTCGACTGATATGCAGAAAGAGATTCTGGGAAAATTGCACAAGGCAATGGAAAGAGTTGTTGGATTTCCTCTAGAGATAGAGCTCTTGATTACTCTTGGGTCAATCCATCCTTCGTTGGTCACGAGTGCAGTATGTGCCGGAAAATTCTTCAGCGAGGAGGAACTGAGAGGAATTGGAATGAGCAGGTTTGATTTAAGGAAAGGGTCAAAGGTGAGATTTGTTTTGAATCTAGTCCATCACATTTCCAAGAGGGAAAAGGTTCTAGTCTTCTGCCACAACATTGCTCCCATCAAGTATTTCGTCGATTTATTCGAGAGCTTCTTCAGGTGGAAGAGGGGTCGAGAAGTTCTGACCCTCACGGGCGATCTCGAGCTGTTCGAACGAGGAAAAATCATGGATACTTTCGAGGATCCAGGCAGCCCATCGAGGGTCTTACTCGCTTCGATCACGGCTTGTGCCGAAGGCATTAGTTTGACGGCTGCTTCTCGTGTTATTTTGCTGGACTCTGAGTGGAACCCTTCCAAGACAAAGCAAGCAATAGCCCGAGCTTTTCGTCCCGGTCAGCAAAAGGTGGTCTACGTTTATCAGCTCTTGATGTCGGGGACTTTGGAAGAAGATAAGTATCGAAGGACGACATGGAAAGAGTGGGTTTCGAGTATGATATTTAGCGAGGCTTTCGTAGAGGACCCTTCTAAGTGGCAGGCCGAAAAGATTGAATTTGAAGATGATGTGCTGAGAGAGATGGTGGAGGAAGACAGGTCAAAATCCTTCCATATGATACTGAAAAACGAGAAGGCTTCGACGACGATCAGAGGTAAGGATTAG 3720 43.01 MCCGSWQAVERIRIKNGTLTFHLVDDQFMVLERGPFLDVRIRSRRASLYDCTIFLRPGIDICVLTTSGLDLEDSKPVWIDAKISSIERKPHDYTCLCEFYVNFYTNEKPLGSGRGKLSKELNVVGIDQISILQKFQKKYCEDQYYRWDFSENSSLLRKTKILVGKFLSDISWLIVTSALKQVSFDVRSVENKMVYEILGGDLEAQSFNSDRCLNMVTFHVENEKLVPLVIRVGSDDTVEDKPTSQTYENKIVPYYGVVELRRSKRRKVQPDRYLGCDKMDELEIDYSKLKPYRTDQCDDDEMTMPLSCLFGMNLSGPEDRMVENRIKFRSSTTASSEKLRLLKNNSKAREMKSSFSDKNKDKMELAIVPLPEHNQLIAFDSYLPGDKMANNYSGQITEISPKYYYINTFRKVRRRNVIPDLEDLELAKTWGGTSSSTKLQRASYHNTSSKGDSNGEERVYRKRSLGAGAYKDLINSFLKMADSTAKREGPQIIDQWKEFKENSRSDRRQEAEPPPNEDEQEMSETEMLWREMELSLASSYLSEDYQVPNAGFSTDMEKGSSNECCHEYILNEELGILCHICGFVSTEIKNVTSPFMQYTSWNTEEKPLTENNAYREADEGEFDVSHGSDLSDPSVIEENENVWALIPELRRKLHLHQRKAFEFLWQNIAGSINPAMMKLASKKIGGCVVSHSPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPVPVHLIHGRRSYRIFRPKSVSFPGFGKPTDDVMHILDCLEKIQKWHAHPSVLVMGYTSFLTLMRDDSAFPHRKFMSRVLRESPGILILDEGHNPRSTKSRLRKGLMKIHTDLRILLSGTLFQNNFGEYFNTLCLARPRFVKEVLKELDPKYRRKNKSVKKAWSLQEARARKFFLDNIAKKIDSDVGEDRMKGLNMLRSLTNGFIDVYEGGNAECLPGLQIYTLLMNSTDMQKEILGKLHKAMERVVGFPLEIELLITLGSIHPSLVTSAVCAGKFFSEEELRGIGMSRFDLRKGSKVRFVLNLVHHISKREKVLVFCHNIAPIKYFVDLFESFFRWKRGREVLTLTGDLELFERGKIMDTFEDPGSPSRVLLASITACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLMSGTLEEDKYRRTTWKEWVSSMIFSEAFVEDPSKWQAEKIEFEDDVLREMVEEDRSKSFHMILKNEKASTTIRGKD 1239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30820135 30824242 - BLOR19858 Blo13g00806 69201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00806 1239 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1038 1199 IPR001650 -
Blo13g00806 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 890 IPR027417 -
Blo13g00806 1239 SMART helicmild6 1067 1152 IPR001650 -
Blo13g00806 1239 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 678 877 IPR014001 -
Blo13g00806 1239 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 1233 IPR044567 GO:0080188
Blo13g00806 1239 MobiDBLite consensus disorder prediction 491 525 - -
Blo13g00806 1239 CDD DEXHc_ATRX-like 653 919 - -
Blo13g00806 1239 SMART ultradead3 649 882 IPR014001 -
Blo13g00806 1239 MobiDBLite consensus disorder prediction 491 515 - -
Blo13g00806 1239 Pfam Helicase conserved C-terminal domain 1035 1151 IPR001650 -
Blo13g00806 1239 Gene3D - 629 919 IPR038718 -
Blo13g00806 1239 MobiDBLite consensus disorder prediction 435 450 - -
Blo13g00806 1239 CDD SF2_C_SNF 1034 1163 - -
Blo13g00806 1239 Pfam SNF2-related domain 650 905 IPR000330 GO:0005524|GO:0140658
Blo13g00806 1239 Gene3D - 1015 1227 IPR027417 -
Blo13g00806 1239 MobiDBLite consensus disorder prediction 435 458 - -
Blo13g00806 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 954 1204 IPR027417 -
Blo13g00806 1239 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 1 1233 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00806 Blo13g00846 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00806 Blo-Chr13:30820135 Blo15g00679 Blo-Chr15:21023410 1.17E-74 dispersed
Blo13g00806 Blo-Chr13:30820135 Blo16g00039 Blo-Chr16:1771705 5.88E-20 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13175 PF00176 SNF2_N 6.00E-16 CL0023 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00806 K10875 - jre:108991882 1600.88