Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00819 ATGGAACCTAAGCAATTCCCCATCATCATCTTTTTGTCTTCTCTCTTACCTCTCTCCTACTACACCCACTTATACACCATGGTTCTTGCGCCATTTTCCGCTGTCTTCCTCCTTCTTACTGTTCTAAACCTCTGTCTTTGCCGCTCATCTGGGGATTATGGAGGGTGGGAGAGCGCCCATGCCACATTCTACGGCGGGGGTGATGCATCTGGCACAATGGGAGGTGCATGCGGGTATGGAAACTTGTATAGCCAAGGATATGGGACTAATACAGCAGCACTGAGCACTGCTCTGTTCAACAATGGCTTGAGCTGCGGTTCCTGCTACGAAATAACTTGCCAGAGTGACCCAAAATGGTGTGTCGGAGGGACCATCACCGTCACAGCCACAAATTTCTGCCCCCCAAATAATGCATTGCCGAATGATAACGGTGGTTGGTGTAATCCTCCTCTTCAGCATTTCGACTTGGCAGAACCTGCTTTCTTGCAAATCGCTCAGTACCGAGCCGGAATCGTTCCGGTTTCGTTTAGAAGAGTTCCCTGCATGAAGAAAGGAGGAATAAGGTTCACTGTGAATGGCCACTCTTACTTCAACCTGGTGTTGGTCACAAACGTAGGAGGAGCAGGAGATGTTCATTCTGTCTCAATCAAAGGCTCGAAAACTGGTTGGCAGCCCATGTCGAGGAACTGGGGCCAGAATTGGCAAAGCAACTCCTACCTCAACGAACAAACCCTCTCCTTTCAAGTGACCACCAGTGATGGCCGGACCGTCACCAGCTACGATGTAGCACCGGAGAATTGGCAGTTCGGACAAACATTTGAGGGAACTCAATTTTAA 837 49.46 MEPKQFPIIIFLSSLLPLSYYTHLYTMVLAPFSAVFLLLTVLNLCLCRSSGDYGGWESAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEITCQSDPKWCVGGTITVTATNFCPPNNALPNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQPMSRNWGQNWQSNSYLNEQTLSFQVTTSDGRTVTSYDVAPENWQFGQTFEGTQF 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30934850 30935855 - BLOR19871 Blo13g00819 69214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00819 278 SMART dpbb_1 91 176 IPR007112 -
Blo13g00819 278 Pfam Expansin C-terminal domain 187 264 IPR007117 -
Blo13g00819 278 PANTHER EXPANSIN-A15 31 278 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Blo13g00819 278 PRINTS Expansin/Lol pI family signature 261 275 IPR007118 GO:0005576
Blo13g00819 278 PRINTS Expansin/Lol pI family signature 223 237 IPR007118 GO:0005576
Blo13g00819 278 PRINTS Expansin/Lol pI family signature 95 113 IPR007118 GO:0005576
Blo13g00819 278 PRINTS Expansin/Lol pI family signature 55 70 IPR007118 GO:0005576
Blo13g00819 278 PRINTS Expansin/Lol pI family signature 169 185 IPR007118 GO:0005576
Blo13g00819 278 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 74 186 IPR007112 -
Blo13g00819 278 SUPERFAMILY PHL pollen allergen 183 275 IPR036749 -
Blo13g00819 278 Gene3D - 43 182 IPR036908 -
Blo13g00819 278 PRINTS Expansin signature 125 135 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 144 161 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 161 174 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 232 253 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 197 218 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 86 100 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 113 124 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 261 277 IPR002963 GO:0009664
Blo13g00819 278 PRINTS Expansin signature 185 197 IPR002963 GO:0009664
Blo13g00819 278 PANTHER EXPANSIN 31 278 - -
Blo13g00819 278 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 196 275 IPR007117 -
Blo13g00819 278 Gene3D - 185 278 IPR036749 -
Blo13g00819 278 Pfam Lytic transglycolase 91 176 IPR009009 -
Blo13g00819 278 SUPERFAMILY Barwin-like endoglucanases 55 204 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01112 Blo-Chr1:39657479 Blo13g00819 Blo-Chr13:30934850 2.77E-124 dispersed
Blo13g00819 Blo-Chr13:30934850 Blo13g00832 Blo-Chr13:31013777 2.99E-149 dispersed
Blo14g00114 Blo-Chr14:820763 Blo13g00819 Blo-Chr13:30934850 1.79E-107 dispersed
Blo17g00731 Blo-Chr17:22268891 Blo13g00819 Blo-Chr13:30934850 5.05E-119 dispersed
Blo13g00819 Blo-Chr13:30934850 Blo04g00187 Blo-Chr4:1518644 1.42E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00819 - K20628 tcc:18587477 450.284