Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00823 ATGGATCCCGACGCCTTCACGGCCAGTTTATTCAAGTGGGACCCTCGAGCTGCTGTTGGACCATCCAACCGCTTACTGGACCCGGTGGCTACTCCACCTGCCGGCGCTGCTGTTGTGTCCACGACGTTCTCAGCCCGACCTTGGGGTCTGGGTGGGCTGGAAGACTTGTTTCAGGCTTACGGTATCAGATACTACACCGCAACGAAGATAGCAGAGCTTGGATTCACCGTGAGCACTCTGTTGAACATGAAAGACGGAGAACTGGACGATATGATGAACAGTCTCTCGCAGATATTCCGGTGGGACCTTTTGGTCGGAGAGAGGTACGGCATTAAAGCAGCTGTTAGAGCCGAGAGAAGACGACTAGACGATGAAATGGATTCGCGGCGCCGCCACTTACTCTCCTCTGATACTGCTAATAACGTTCTTGATGCTCTCTCTCAGGAAGGTCGATTATCGGAGGAGCCCGTGCATCAGGAAAAGGAGGTAATCGGGAGCGGAGGCGGAGGACCAAGGGACGTGATTGCAGCTTCAGAGAAGCACCGTCGGCGTCGGAAGGGGCAAAGAAAACTGCTAGTTGACCTCGATAATGACGGAAACGATGTAGGAGAAGAAGATGATGACGACATTAACGGTGGAAATGAAAGACAACGAGAACACCCGTTCATCGTGACAGAACCAGGAGAAGTTGCGAGAGGGAAGAAGAATGGCCTCGATTACCTCTTCCACCTCTACGAACAGTGCCGTGATTTTCTGTTGCAGGTGCAGAATATTGCCAAGGACCGCGGCGAGAAATGCCCAACCAAGGTGACGAACCAGGTATTTAGATACGCGAAGATGGCCGGAGCAAGCTACATCAACAAGCCCAAAATGCGGCACTACGTCCACTGCTACGCGCTGCATTGCCTGGACGAGGAGGCATCGAATGCGCTGAGGAGGGCATTCAAAGAGAGTGGAGAGAACGTCGGAGCTTGGCGACAAGCCTGCTACAAACCTCTGGTGGGCGTCGCCGCTCGGCAAGGGTGGGACATAGATGCGATATTCAACTCCCATCCTCGTTTGGCTATTTGGTACGTCCCCACCAAACTCCGGCAGCTTTGCCACTCTGACCGCAATAGCGCTGCAGCTTCGAGCTGTGTCACCAATGGCCGCGATCTCATTCCCTTCTGA 1170 53.93 MDPDAFTASLFKWDPRAAVGPSNRLLDPVATPPAGAAVVSTTFSARPWGLGGLEDLFQAYGIRYYTATKIAELGFTVSTLLNMKDGELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLDDEMDSRRRHLLSSDTANNVLDALSQEGRLSEEPVHQEKEVIGSGGGGPRDVIAASEKHRRRRKGQRKLLVDLDNDGNDVGEEDDDDINGGNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLLQVQNIAKDRGEKCPTKVTNQVFRYAKMAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKESGENVGAWRQACYKPLVGVAARQGWDIDAIFNSHPRLAIWYVPTKLRQLCHSDRNSAAASSCVTNGRDLIPF 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30956027 30957426 + BLOR19875 Blo13g00823 69218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00823 389 PANTHER PROTEIN LEAFY 1 385 IPR002910 GO:0003677|GO:0006355
Blo13g00823 389 Pfam Floricaula / Leafy protein SAM domain 50 126 IPR035079 -
Blo13g00823 389 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 211 375 IPR035209 GO:0003677
Blo13g00823 389 MobiDBLite consensus disorder prediction 149 220 - -
Blo13g00823 389 Gene3D Protein LEAFY 212 381 IPR038276 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00823 Blo-Chr13:30956027 Blo04g00181 Blo-Chr4:1497225 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13176 PF17538 C_LFY_FLO 1.40E-107 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00823 - - vvi:100252653 591.267