Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00829 ATGGGGAATCTAGGTGAGGTGCTCATCTTGTTACTATTGGCTCCGGTGTTCGCGCGCGGTCTGAATCCCTCTCTGAACGATGATGTATTGGGACTCATCGTGTTCAAGGCCGATATTCAAGATCCGAAGGGGAATCTTGCCTCTTGGAATGAAGACGATGATTTTCCGTGTAACTGGGTCGGTGTGCAATGCAACCCGAGATCCAAGCGGGTCACTGAGCTCAACCTTGCCGGTTTCTCCCTCTCCGGTCGTCTAGGCCGAGGCCTCGTGCAGCTACAGTTTCTGCGAAAGCTATCGCTCTCGGACAACAATCTCACCGGAAATGTAGGCCCTAACATTGCACGGATCGATAATCTGCGAGTGATCGATTTGGGGAATAACGGCTTTTCAGGGAGTTTACCTAACGATTTCTTCAAGCAATGTGGGTCTTTGAGAGTGGTTTCTTTGGCCGGGAACAAATTTTCAGGGAATATCCCAGACAGTTTAACCTCATGCGCTGGTCTCGCTGCACTTAATTTGTCATCTAATCAGTTCTCTGGTTCATTACCTTCTGTAATTTGGTCCCTAAGTGAACTTCGCTCGCTTGATTTGTCGGATAATCAATTAGAGGGTAACATTCAGAAGGAGGTCGAAGGCATGAATAATTTGCGAGCTATTAACTTGAGTAAGAACCGATTTTCTGGGCAGATTCCCGACGGAATCGGAAATTGTTTGCTCTTGCGCTCCGTAGACCTTAGTGAGAATTCGTTTTCCGGCGACCTTCCAGACACCCTCCGGCGACTTTCTCTGTGTCATAATTTAAAGTTGCAGAAGAACTCATTTGTTGGCCAAGTTCCTGACTGGATACAGGAAATGAAAAGTCTAGAGACGGTGGATCTTTCGGCAAACACATTTTCCTGTCAGATTCCTGATTCAGTCGGAAATCTCCACTCGCTCAAGGTATTGAATTTTTCAAGTAATGGCTTTACTGGTAGTTTGCCGGAGTCTCTGATTAATTGCCAGAGCTTAATGGTCTTAGATTTCAGTCATAATTCTATCTCCGGTGATTTCTCTACCTGGATTTCCAAAATGGGCTCACAAAATCTCTTGCTTTCAGAGAGCAAGCAAAGCAGAAGCCCGACTAGTCCGATATCTACTGTATTTGAGAAATCACTTCCAAATCTTCATATCTTGGACCTTTCTCACAATGCTTTCTCTGGTGTATTGACGCCTGACATTGAGATTTTTGACAACCTGCAGCTCTTAAACTTGGCCGGAAATTCTCTCGCCGGCGATATTCCGAAATCCATTGGAGGTCTGACGGCCCTGGACACCCTTGATTTGAGTGGGAACGGGCTAAATGGAAGTATTCCGGAGGAAATTTGTGATGTAGCCGCCATGAAGGTACTGAAACTGGCGAAAAACTCTCTTGCAGGATCAATTCCTTATTCAATCGGAAAGTGTTCTTCTCTGGTGACTCTAATCTTATCGGAGAACAAATTATCCGGCCAGATACCCGCATCCATGGCTAACCTTACTGATCTTCAAAATGTGGACTTGTCTTTTAACCTCCTCAATGGAACTCTCCCTAAGCAGCTCTCTAATCTTCCCAACGTAGTGCTGTTCAATATTTCGCACAATGACATCCATGGCGAACTGCCTGCAGGAGGATTTTTCAACACCATATCCCCTTCCTCTGTCTCAGGCAATCCATCTCTTTGTGGCTCTGTTGTTAAGAAATCTTGCCCTGCAGTTCTTCCCAAACCCATTGTTCTTAACCCCAACTCTTCCTCTGACTCCACTTCAACTGCTCTCCCTTCTGGTCTTGCTCACAAGAGTATCATCCTCAGCGTATCAACTCTCATCGCCATTGGAGCAGCTGCTTTGATTGTGATTGGCGTAATAGCAATCACTGTTCTTAATCTCCGAGCTCGAGCATCCATCTCTCGTTCTGCATCAGCCCTCGCAATATCTGCCGGAGATGACTTTAGTCGCTCCCCCACCTCTGACGCCAGTTCTGGCAAGCTTGTCATGTTTTCTGGCGACCCTGACTTCAGTACGGGGGCTCATGCTTTGCTCAACAAAGATTGTGAGCTCGGGAGAGGTGGATTCGGGACGGTCTACAAGACCCTTCTTCGGAATGGGCATTCAGTTGCGATCAAGAAGCTAATTGTCTCTAGTCTTGTCAAGTCCCAAGACGATTTCGAAAAGGAAGTAAAGAAGTTGGGGAAAGTCCGGCACCGGAATATCGTCACCCTTCATGGTTATTACTGGACTCCATCACTGCAGCTCCTCATCTCTGAATTTGTTGCAGGAGGAAGTTTGTATTCGCACCTCCATGAAGCATCGGACGGAAATCTCCTCTCGTGGAATGAGAGGTTCAACATAATACTCGGGACAGCGAAAAGCATGGCATACTTACACCAAGTGAACATAATCCACTACAATATCAAGGCAAGCAACGTATTGATCGACAGCTCTGGCGAACCAAAGGTCGGAGATTTCGGCCTGGCAAGGCTATTGCCAATGCTAGACCGGTACGTTTTGAGCAGCAAGATTCAGAGTGCACTTGGCTATATGGCACCTGAATTTTCCTGTAAAACGGTGAAGATAACGGAAAAATGTGATGTTTATGGGTTTGGGGTTTTGGTCTTGGAAGTGGTCACCGGAAAAAGACCGGTCGAGTACATGGAAGATGATGTGGTTGTTCTTTGTGACATGGTGAGAGGAGCATTGGAAGAAGGCAAGGTGGAAGAATGTGTCGACCGGAGACTCTTGGGGAACTTTCCGGCCGAGGAAGCAATTCCGGTCATGAAATTAGGCTTGATCTGCACGTCTCAAGTGCCGTCAAACCGGCCGGACATGGGTGAGGTCGTAAATATATTGGAGCTGATACGATGCCCGTCGGAAGGTAACGACGAATCAGGATGA 2910 46.94 MGNLGEVLILLLLAPVFARGLNPSLNDDVLGLIVFKADIQDPKGNLASWNEDDDFPCNWVGVQCNPRSKRVTELNLAGFSLSGRLGRGLVQLQFLRKLSLSDNNLTGNVGPNIARIDNLRVIDLGNNGFSGSLPNDFFKQCGSLRVVSLAGNKFSGNIPDSLTSCAGLAALNLSSNQFSGSLPSVIWSLSELRSLDLSDNQLEGNIQKEVEGMNNLRAINLSKNRFSGQIPDGIGNCLLLRSVDLSENSFSGDLPDTLRRLSLCHNLKLQKNSFVGQVPDWIQEMKSLETVDLSANTFSCQIPDSVGNLHSLKVLNFSSNGFTGSLPESLINCQSLMVLDFSHNSISGDFSTWISKMGSQNLLLSESKQSRSPTSPISTVFEKSLPNLHILDLSHNAFSGVLTPDIEIFDNLQLLNLAGNSLAGDIPKSIGGLTALDTLDLSGNGLNGSIPEEICDVAAMKVLKLAKNSLAGSIPYSIGKCSSLVTLILSENKLSGQIPASMANLTDLQNVDLSFNLLNGTLPKQLSNLPNVVLFNISHNDIHGELPAGGFFNTISPSSVSGNPSLCGSVVKKSCPAVLPKPIVLNPNSSSDSTSTALPSGLAHKSIILSVSTLIAIGAAALIVIGVIAITVLNLRARASISRSASALAISAGDDFSRSPTSDASSGKLVMFSGDPDFSTGAHALLNKDCELGRGGFGTVYKTLLRNGHSVAIKKLIVSSLVKSQDDFEKEVKKLGKVRHRNIVTLHGYYWTPSLQLLISEFVAGGSLYSHLHEASDGNLLSWNERFNIILGTAKSMAYLHQVNIIHYNIKASNVLIDSSGEPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFSCKTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEECVDRRLLGNFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGNDESG 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30996804 30999927 + BLOR19881 Blo13g00829 69224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00829 969 Pfam Leucine rich repeat 386 446 IPR001611 GO:0005515
Blo13g00829 969 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Blo13g00829 969 Gene3D Transferase(Phosphotransferase) domain 1 763 967 - -
Blo13g00829 969 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Blo13g00829 969 CDD STKc_IRAK 692 958 - -
Blo13g00829 969 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Blo13g00829 969 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 966 - -
Blo13g00829 969 Gene3D Phosphorylase Kinase; domain 1 680 762 - -
Blo13g00829 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 7 966 - -
Blo13g00829 969 Gene3D Ribonuclease Inhibitor 26 303 IPR032675 -
Blo13g00829 969 SMART LRR_typ_2 309 333 IPR003591 -
Blo13g00829 969 SMART LRR_typ_2 433 457 IPR003591 -
Blo13g00829 969 SMART LRR_typ_2 213 237 IPR003591 -
Blo13g00829 969 SMART LRR_typ_2 505 529 IPR003591 -
Blo13g00829 969 SMART LRR_typ_2 116 140 IPR003591 -
Blo13g00829 969 SMART LRR_typ_2 385 411 IPR003591 -
Blo13g00829 969 SMART LRR_typ_2 189 212 IPR003591 -
Blo13g00829 969 SUPERFAMILY Protein kinase-like (PK-like) 690 953 IPR011009 -
Blo13g00829 969 ProSiteProfiles Protein kinase domain profile. 686 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00829 969 Pfam Protein tyrosine and serine/threonine kinase 688 953 IPR001245 GO:0004672|GO:0006468
Blo13g00829 969 Pfam Leucine Rich Repeat 118 137 IPR001611 GO:0005515
Blo13g00829 969 PRINTS Leucine-rich repeat signature 385 398 - -
Blo13g00829 969 PRINTS Leucine-rich repeat signature 192 205 - -
Blo13g00829 969 SMART LRR_sd22_2 189 215 - -
Blo13g00829 969 SMART LRR_sd22_2 385 414 - -
Blo13g00829 969 SMART LRR_sd22_2 92 121 - -
Blo13g00829 969 SMART LRR_sd22_2 505 531 - -
Blo13g00829 969 SMART LRR_sd22_2 433 459 - -
Blo13g00829 969 Gene3D Ribonuclease Inhibitor 304 578 IPR032675 -
Blo13g00829 969 SUPERFAMILY L domain-like 41 358 - -
Blo13g00829 969 SUPERFAMILY RNI-like 273 554 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00419 Blo-Chr2:5508297 Blo13g00829 Blo-Chr13:30996804 3.83E-21 dispersed
Blo06g01095 Blo-Chr6:34259661 Blo13g00829 Blo-Chr13:30996804 3.27E-12 dispersed
Blo07g00078 Blo-Chr7:1135218 Blo13g00829 Blo-Chr13:30996804 0 dispersed
Blo13g00829 Blo-Chr13:30996804 Blo07g01053 Blo-Chr7:30338810 8.64E-138 dispersed
Blo03g00181 Blo-Chr3:4463680 Blo13g00829 Blo-Chr13:30996804 5.89E-165 transposed
Blo07g01102 Blo-Chr7:30867442 Blo13g00829 Blo-Chr13:30996804 0 transposed
Blo13g00829 Blo-Chr13:30996804 Blo04g00177 Blo-Chr4:1474825 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84637 PF07714 PK_Tyr_Ser-Thr 1.50E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00829 - - qsu:111988975 1378.62