Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00832 ATGGCGGTGGCTGGATTGCCTGCTCTATGCATTATACTCCTGGCCCTCCACCTTAGCTTTGGTAGCGGTTATGGGCAGTGGGAGAGCGGCCATGCCACATTCTACGGCAGTGAAGATGCATCTGGCACAATGGGGGGAGCTTGTGGGTATGGGAACTTGTATAGCCAAGGGTACGGGACCAACACTGCAGCGTTGAGCACCGCCCTGTTCAACAGCGGGCTGAGCTGTGGGAGCTGCTACGAGCTCACTTGCAGTAGTGATCCAACATGGTGCCTTCCTGGCTCTATCATCGTCACTGCTACTAACTTTTGCCCACCTAACTATGCTTTGTCCAATGACAATGGCGGCTGGTGCAATCCTCCCCTCCAACACTTCGACTTGGCCGAGCCTGCTTTCCTCCAAATCGCGCAGTATCGAGCTGGAATCGTTCCTGTATCCTTCAGAAGGGTCCCCTGCCAGAAGAAAGGTGGAGTAAGATTCACCATTAATGGACACTCTTACTTCATCTTGGTTCTGGTGACCAACGTCGGAGGTGCAGGAGACGTTCAAGCAGTCTCAATCAAGGGATCAAGTACAGGGTGGCAGCCAATGTCGAGGAACTGGGGGCAGAACTGGCAGACCAACTCTCTGCTCGACGGTCAGAGCCTCTCTTTCCAAGTCACCACCAGCGATGGACGCTCTATCACTAGCTACGACGTTGCCCCGGCTGGTTGGCAGTTTGGCCAAACTTTTGAGGGAAGCCAATTCTAG 750 54.13 MAVAGLPALCIILLALHLSFGSGYGQWESGHATFYGSEDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYELTCSSDPTWCLPGSIIVTATNFCPPNYALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCQKKGGVRFTINGHSYFILVLVTNVGGAGDVQAVSIKGSSTGWQPMSRNWGQNWQTNSLLDGQSLSFQVTTSDGRSITSYDVAPAGWQFGQTFEGSQF 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31013777 31014713 + BLOR19884 Blo13g00832 69227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00832 249 Gene3D - 155 249 IPR036749 -
Blo13g00832 249 PANTHER EXPANSIN-A15 16 249 IPR002963 GO:0009664
Blo13g00832 249 Gene3D - 17 153 IPR036908 -
Blo13g00832 249 Pfam Lytic transglycolase 62 147 IPR009009 -
Blo13g00832 249 PANTHER EXPANSIN 16 249 - -
Blo13g00832 249 SMART dpbb_1 62 147 IPR007112 -
Blo13g00832 249 SUPERFAMILY PHL pollen allergen 154 246 IPR036749 -
Blo13g00832 249 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Blo13g00832 249 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Blo13g00832 249 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Blo13g00832 249 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Blo13g00832 249 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Blo13g00832 249 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Blo13g00832 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Blo13g00832 249 Pfam Expansin C-terminal domain 158 235 IPR007117 -
Blo13g00832 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Blo13g00832 249 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Blo13g00832 249 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Blo13g00832 249 SUPERFAMILY Barwin-like endoglucanases 12 175 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00426 Blo-Chr12:21683742 Blo13g00832 Blo-Chr13:31013777 2.04E-110 dispersed
Blo13g00819 Blo-Chr13:30934850 Blo13g00832 Blo-Chr13:31013777 2.99E-149 dispersed
Blo13g00832 Blo-Chr13:31013777 Blo16g01112 Blo-Chr16:39592483 8.93E-142 dispersed
Blo10g00222 Blo-Chr10:2866533 Blo13g00832 Blo-Chr13:31013777 5.48E-94 transposed
Blo15g00413 Blo-Chr15:5885000 Blo13g00832 Blo-Chr13:31013777 6.78E-90 transposed
Blo18g00408 Blo-Chr18:4373156 Blo13g00832 Blo-Chr13:31013777 3.65E-107 transposed
Blo13g00832 Blo-Chr13:31013777 Blo04g00187 Blo-Chr4:1518644 2.61E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00832 - K20628 ming:122083244 440.654