Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00857 ATGGAAAATAAAAATCTGAGCCAAAACAATGGAAATATCTTCAAGGGCTCGATTCTGCTTGAATTATCAGCCTCTGATGATCTCGATGCCTTCAGGAGAGAAGTCGAAGAGAAAGGGCTCCATATAAATGAGTTAGCGTATTGGTACAGCAGGAAAATTGGGTCTAGAAAGATGGGTTTCGAGGAAAGGACCCCACTTCTAATTGCAGCCATGTTTGCAAGTGCTAAGATCGCGAAATACATAATCGAAACTGGCAAAGTCGATGTGAATAAGGCATATGGTTCGGATAAGGTCACTGCTCTCCACTGTGCTGTTGCTGGTGGCTCAAGCCATTCAACTGAGATTATCAAACTCTTACTCGATGCCTCTGCAGATGCTAATTCTGTCGATTCTAATGGCAACAAGCCTGTCGATTTGATTACCCCGTCTACGAAATCACCTCCCAATCCAAGGAGGAAGACGATGGAGATGTTTCTCAAAGGTGATTATTTGAGTGGTTTAGTTGCTCAAAGCAATGAGCAATTGGAAGATCAGCAGAAGATCTCTGAGAGGAAAGAATATCCTCTTGATGTTTCCTTGCCGGACATAAACACTGGAATTTACGGAACCGATGAGTTTAGAATGTATAGTTTTAAGGTTAAGCCTTGTTCGAGGGCGTATACTCACGATTGGACCGAATGCCCTTTTGCACATCCCGGCGAGAATGCAAGGCGGAGGGACCTGCAAAAATATTCCTATAGTTGTGTCCCTTGCCCTGAGTTTCGCAAAGGGGCTTGCCAGAAAGGTGATGCCTGTGAATATGCACATGGAGTCTTCGAGTCATGGCTTCACCCTGCTCAATACAAGACCAGGCTCTGCAAGGACGAGATCGGATGTGGGAGGAAAGTGTGCTTCTTTGCTCACAAGCCTGAAGAATTAAGGCCGGTCTATGCCTCTACAGGCTCGGCCTTGCCATCGCCTTGCTCACAATCTGTCAGCAGCCCAGAAATGGGCGCTTTGTCTCTTCCTGCTACTTCTACACCGCCTATGTCTCCTTTGGGATCTGTCTCATCACCCATGAGTGCAGCCTTGTGGCAAAACAAAGTTACTCTTACACCTCCTACTTTGCAGTTGCCGGGTAGCCGACTGAAGACTTCTTCGAGTGTGAGAGATTTAGATTTTGAAATGGAATTGCTCAGCTTGGAAAATCGAACCAATCAACAGCAACAATATCAGCATTTAGTGGATGAGATTTCTCGTCTCTCCTCTCCTACCTACCGGAGCAATGATTTTAGAAGGAATGGAGAACTGAAACAGACTAACTATTGTGATGTGTTTGGAAATTCAGATTTCCCCATGTTGTCTCAGCTGCAGGGGCTCTCGCAATCAACGCCAACTCAATTGCAAAATGGGCTTCGGACAAGCCAGAGAATGAATCAACTTCGATCAAGTTACCCAACAAAGCTCTCCGCTTCACCGGTGAGGAAACCTTCTCCATTTGGGCTCGACTCATCGGCAGCAGTGGCATCTGCCGTTATGAACTCCAGGTCCTCAGCCTTTTCAAAGCGGAGCCAGAGTTTCATCGACCGTGCCGCACCGGCCCACCTCTCAGGGCTTACTTCCCCTTCAAATTTGTCGGCATGGGGCTCCCCGGATGGAAAATTAGATTGGAGCGTCCAAGGAGATGATCTAAATAAACTGAAAAAATCAGCTTCTTTTGGATTCAGAGCTGGAGCCACCGGCTCGATGCCATCTGCACTCAACGAGCCAGATGTGTCGTGGGTCAACTCATTGGTTAAGGACGTTCCTTTGGAGAAATCCGAGTCTTTTTGTGCCGATAAGCTGGCATACAGCCATGGAAGGGGGGGTCGTGAGTTTCTTCCTTCTTGGGCGGAGCAGCTGTATATAGAACCGGAGCAGATGGTAGCATAA 1911 47.2 MENKNLSQNNGNIFKGSILLELSASDDLDAFRREVEEKGLHINELAYWYSRKIGSRKMGFEERTPLLIAAMFASAKIAKYIIETGKVDVNKAYGSDKVTALHCAVAGGSSHSTEIIKLLLDASADANSVDSNGNKPVDLITPSTKSPPNPRRKTMEMFLKGDYLSGLVAQSNEQLEDQQKISERKEYPLDVSLPDINTGIYGTDEFRMYSFKVKPCSRAYTHDWTECPFAHPGENARRRDLQKYSYSCVPCPEFRKGACQKGDACEYAHGVFESWLHPAQYKTRLCKDEIGCGRKVCFFAHKPEELRPVYASTGSALPSPCSQSVSSPEMGALSLPATSTPPMSPLGSVSSPMSAALWQNKVTLTPPTLQLPGSRLKTSSSVRDLDFEMELLSLENRTNQQQQYQHLVDEISRLSSPTYRSNDFRRNGELKQTNYCDVFGNSDFPMLSQLQGLSQSTPTQLQNGLRTSQRMNQLRSSYPTKLSASPVRKPSPFGLDSSAAVASAVMNSRSSAFSKRSQSFIDRAAPAHLSGLTSPSNLSAWGSPDGKLDWSVQGDDLNKLKKSASFGFRAGATGSMPSALNEPDVSWVNSLVKDVPLEKSESFCADKLAYSHGRGGREFLPSWAEQLYIEPEQMVA 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31160361 31162271 - BLOR19909 Blo13g00857 69252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00857 636 Gene3D - 247 308 - -
Blo13g00857 636 Pfam Ankyrin repeats (3 copies) 57 129 IPR002110 GO:0005515
Blo13g00857 636 SMART ANK_2a 61 91 IPR002110 GO:0005515
Blo13g00857 636 SMART ANK_2a 96 128 IPR002110 GO:0005515
Blo13g00857 636 PANTHER UNKEMPT FAMILY MEMBER 7 635 IPR045234 -
Blo13g00857 636 SMART c3hfinal6 245 271 IPR000571 GO:0046872
Blo13g00857 636 SMART c3hfinal6 280 303 IPR000571 GO:0046872
Blo13g00857 636 ProSiteProfiles Ankyrin repeat profile. 96 131 IPR002110 GO:0005515
Blo13g00857 636 ProSiteProfiles Zinc finger C3H1-type profile. 245 272 IPR000571 GO:0046872
Blo13g00857 636 SUPERFAMILY Ankyrin repeat 18 138 IPR036770 -
Blo13g00857 636 ProSiteProfiles Ankyrin repeat region circular profile. 96 130 - -
Blo13g00857 636 Gene3D - 18 157 IPR036770 -
Blo13g00857 636 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 250 270 IPR000571 GO:0046872
Blo13g00857 636 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 7 635 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00230 Blo13g00857 CCT
Blo04g00230 Blo13g00857 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01252 Blo-Chr7:32675860 Blo13g00857 Blo-Chr13:31160361 7.52E-141 dispersed
Blo11g00136 Blo-Chr11:1060843 Blo13g00857 Blo-Chr13:31160361 1.60E-134 dispersed
Blo13g00857 Blo-Chr13:31160361 Blo14g00534 Blo-Chr14:7801614 2.43E-51 dispersed
Blo13g00857 Blo-Chr13:31160361 Blo13g01039 Blo-Chr13:32736790 0 wgd
Blo13g00857 Blo-Chr13:31160361 Blo04g00230 Blo-Chr4:1804209 0 wgd
Blo13g00857 Blo-Chr13:31160361 Blo04g00155 Blo-Chr4:1270802 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13183 PF12796 Ank_2 5.10E-07 CL0465 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00857 - - qsu:112011943 848.966