Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00859 ATGTCGCCCAGTACCGTGACAGCGCGATCCCTGTGGCGCGCTCGAGCGAAGGTCGCTTTTGCCGCCACTGCGATATGTGGTGGCACGGCTGCGGCCGCTGTAGCCACCTCCGACGACCCTTCCATGACGCTTAAGATCTGCACCGCTGTCCCTATCCGCCTCGTTCGCCTCTCCTTCACTGCCGCCACAGTTGCCTTCGATTACAAATATTCATTGTGGGGGACAACCGAAGGGAGCAGTGAAAGGGAAAATGTTAAACATGAAGTTCACCTTAGGTCTGCACACAGACTTCGGGACTTGTGTTTCAAAAATGGAGGAATTTATATCAAGCTTGGTCAACACATTGGGCAATTGGAATATGTGGTTCCTCAAGAGTATGTACAGACTATGAGAGAGTACATGCTAAATAAATGTCCAGTTTCTTCATACGATCAAGTGTGCGAAGTGTTAGAGAAGGAACTTGGAGATTCACCTGACAAAATATTTTCTGAGTTTGATCCAATTCCAATAGCAAGTGCTTCCCTTGCACAAGTTCACGTAGCTCGCACACATGATGGCCAAAAAGTTGCTGTGAAGGTCCAACATACGCACATGACTGATACTGCGGCTGCAGATCATGCTAGTGTGAGTGTAATAGTGAACTCCCTATATAAGATTTTCCCATCTGTTGACTATAGATGGTTGGTTGATGAGATTAGTGAAAGTTTACCTAAGGAACTTGACTTCCTGGTTGAGGCCAAGAACAGTGAAAAATGCTTGGCTAATTTTCGGAAGTTATCTCCTCATATTGCAGAGTCTGTATATGCACCAAAAGTGTTTTGGAATTTAAGTACCTCAAAATTGTTGACCATGGAATTCATAGATGGTGCATATATAAATGATGTGCAAGCCATTCAAGGACTTGGGATTCAGCCAAGCGAAGTCGCTAAATTAGTTAGTCAGGCTTTTGCTGAAATGATGTTCAAGCATGGATTTGTGCACTGTGACCCACATGCTGCCAACTTGCTTGTTCGGCCTATGCCATCCAGCAAAATAAGCATTCTAGGCAAGAGAAAACCGCAGTTGATTCTTCTAGACCATGGGCTGTATAAAGAACTTGATTTCAATACAAGATTTAACTATGCTGGCCTTTGGAAGGGGTTGATATTTTCTGATGCTAATGCTATAAAGGAAAATAGTGTAAAATTGGGTGCTGGGGAAGATTTGTATGCACTCTTTGCAGGAATTCTTACCATGAGGCCATGGAACCGAGTCATTGACCCTGCGATCGACCATTTGGCTATACGAGGCAGCGATAGTGAGCGTTCAGAACTACAGATGTATGCATCTCAATATTTGCCTCAAATCTCAGAACTTCTAAGGAGATTACCTCGTGTGATCTTGCTATTGATGAAGACAAACGATTGTTTACGATCAGTCAGCAGTTCTTTGCTTGTCTCCGTTGTTTTCCAAAAACAAGTGAATGGAGTTGGAATCGATCCTAGTGCTGATGCAGACACTGTTGAATCTGGTTCTAAAGTAGAGATTCCTTTTTGGCTTGCTCACGAGTTACATCTCAGACAAGTAGTGGCAATGAGTGTTCCACCATGTTTCAATCAAAAAACACGTCTAGAAATTCAGGCAGATGTTGCATTTGTCGATCTCCGATCTCGATGTCGTTATTTCTATGAATTTGGATGCAAGGTAGCACCATTAGTTGGTGATAGATCAATCGGAGCTTGGCTTCTGTCAACTTTTAGGAGTAGATATAAAGAAGTTCTTACCAAGGCTCACTCTGCATCATTTGCAGCAACTTCCAAATTTTCGACACTTTTATCGCAAGAAGAAACAAACCTGTATGAGGCAGCTCAATCTTCAATGACAGCCGTAAAGAAATGGCGAATTGGAGGGCCCAGATTTCAAACAGCTTCTTTTCTTCGGAAAAAACGCAAACCTGTCGAATAG 1944 43.31 MSPSTVTARSLWRARAKVAFAATAICGGTAAAAVATSDDPSMTLKICTAVPIRLVRLSFTAATVAFDYKYSLWGTTEGSSERENVKHEVHLRSAHRLRDLCFKNGGIYIKLGQHIGQLEYVVPQEYVQTMREYMLNKCPVSSYDQVCEVLEKELGDSPDKIFSEFDPIPIASASLAQVHVARTHDGQKVAVKVQHTHMTDTAAADHASVSVIVNSLYKIFPSVDYRWLVDEISESLPKELDFLVEAKNSEKCLANFRKLSPHIAESVYAPKVFWNLSTSKLLTMEFIDGAYINDVQAIQGLGIQPSEVAKLVSQAFAEMMFKHGFVHCDPHAANLLVRPMPSSKISILGKRKPQLILLDHGLYKELDFNTRFNYAGLWKGLIFSDANAIKENSVKLGAGEDLYALFAGILTMRPWNRVIDPAIDHLAIRGSDSERSELQMYASQYLPQISELLRRLPRVILLLMKTNDCLRSVSSSLLVSVVFQKQVNGVGIDPSADADTVESGSKVEIPFWLAHELHLRQVVAMSVPPCFNQKTRLEIQADVAFVDLRSRCRYFYEFGCKVAPLVGDRSIGAWLLSTFRSRYKEVLTKAHSASFAATSKFSTLLSQEETNLYEAAQSSMTAVKKWRIGGPRFQTASFLRKKRKPVE 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31171733 31181142 - BLOR19911 Blo13g00859 69254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00859 647 SUPERFAMILY GINS helical bundle-like 527 628 IPR036224 -
Blo13g00859 647 CDD GINS_A_psf3 527 629 - -
Blo13g00859 647 CDD ADCK1-like 134 397 IPR045307 -
Blo13g00859 647 PANTHER BNAC04G05270D PROTEIN 612 644 - -
Blo13g00859 647 PANTHER BNAC04G05270D PROTEIN 479 582 - -
Blo13g00859 647 SUPERFAMILY Protein kinase-like (PK-like) 139 338 IPR011009 -
Blo13g00859 647 Pfam ABC1 atypical kinase-like domain 134 392 IPR004147 -
Blo13g00859 647 PANTHER ABC1 FAMILY PROTEIN 612 644 - -
Blo13g00859 647 PANTHER ABC1 FAMILY PROTEIN 16 478 - -
Blo13g00859 647 Pfam GINS complex protein 507 610 IPR021151 -
Blo13g00859 647 PANTHER ABC1 FAMILY PROTEIN 479 582 - -
Blo13g00859 647 SUPERFAMILY PriA/YqbF domain 478 528 - -
Blo13g00859 647 PANTHER BNAC04G05270D PROTEIN 16 478 - -
Blo13g00859 647 Gene3D - 472 628 IPR038437 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00859 Blo13g00726 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00859 Blo-Chr13:31171733 Blo17g00479 Blo-Chr17:6855462 3.50E-75 dispersed
Blo13g00859 Blo-Chr13:31171733 Blo01g01665 Blo-Chr1:56394273 9.32E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00859 K08869 - csv:101216868 752.281