Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00883 ATGATTGAGAGTTACACGCGTATAATTCGGCAAATACGTTATTCTTGGCTGAAAATTCGGCGGAAAGCTTTTCCGCAACTTGTTTCTGTTGCCCAAAAGCTTCATCTTTTAAGCTCATCACTCAACCCTCCGCCATTTTCATTCTCAAAATTGGAGCTTTTATTCTCAGAAAACGTTGCCCTCTGGGCGTCGGAAGCTTACCGGAGAGAGACGAACTTGAATTTCAGGCGTACGTTAATTAGACTTGAGTTGAGTTTGATGGGTTTAATGTTCCAGTTTAAAAGCTCAAATTTGTCGTGGCGCTGCGCAGATGACCTTCCCGTCAAAGCGACAGGTGTTGAAATTCCGTCTGTAAAAAAGAATAGACTGAACAATTCTTGCCCTGTTTGTCGTCATGAATTGCCATCTGATTACCAGAACCCATCTGATTCAGGGAGGGGCATGGATGGACAATCATTACCTTTGGACGAAGATGAAAATGTCGAGTTGACGATTTGCAGGTTGCCAGGGGGTGGGTTTGCGGTGGGAAGGTTTCTAGCCGGGAGAAGAGGAGGTGAGAGAGAGGTTCCGGTAGTTTACACTGAGGTGGATGGTGGATTTAGCAATGGAAGCCTGCCAAGGAGGATTTCTTGGGCTTCCTCCTCTGTTTCTTCTTCTTCTTCGCCTTCTTTTCCCCCTCCTCTTCAAACAAGTTCTCTGTTTCTCTGCAATAGAGCCATTAATATTACCTCTCAAACTTCATATCATACGCAGACGCTTCCTCCATCGAAGGCAACCTCGCTTCTAAAACTTGAATCCAGCCTGGGACGATATTCGGATGCATGGACACAAGTTTCAGTTCAAACTCCGACGAAGACTCTAAAACCACGGGGCAGATGGGCATCAACCGTGGGATATGAGTTTTGCTTTTCGTGGAACAAGAGCATCGGATATAGAACATGGTTTATCCGGGTTTATCCTGGACCGCCAAGCCATGCACGTCCCGTTAATTCCAACTCGCTTGCTTTTCTTGTCACAGTGTTGTTGCTATTCATGATACTTAACTCACACCAGATGTCTCCCAACTTTCTGCTTTGGCTTGTACTTGGTGTCTTTCTAATGGCCACAACCTTAAGAATGTATGCAACTTGTCAACAACTTCAAGCTCAGGCCCAAGCTCATGCTTTGGCTGCCAGTGGCATTCTCGGTCACACCGAATTGCGGTTGCATATGCCACATTCCATTGCGCTCGCGACGAGGGGGCGTTTGCAGGGACTTAGACTTCAGCTTGCACTACTTGACCGGGAATTCGACGACCTAGATTATGAAACGCTGCGAGCCCTGGATTCGGATAATGTTCCATCAGCTCTATCGTTGAGCGAAGAAGAAATAAACGCTCTTCCTGTTCACAAGTACAAGGCTGTTAGTTCTCAAAATGGAAATGCATTGGTTCAACAAGGCTCCTCTTCTACATCTGTTGAGAAGAATCAAGATTCGACTAATCCTGTCGGTAATACAAACGCCACGGAGGACGTACTAACCTGTAGCGTGTGCTTGGAGCAAGTTAATTTTGGAGAAGTCATCCGTAGTTTGCCATGCATGCATCAGTATTTATTCGCCACAAAGCTTAAAAAACACGTAAATCCGAGCATGAAATTGTACGGCGAAGAAGCTGAATTACTTTACTAA 1668 45.56 MIESYTRIIRQIRYSWLKIRRKAFPQLVSVAQKLHLLSSSLNPPPFSFSKLELLFSENVALWASEAYRRETNLNFRRTLIRLELSLMGLMFQFKSSNLSWRCADDLPVKATGVEIPSVKKNRLNNSCPVCRHELPSDYQNPSDSGRGMDGQSLPLDEDENVELTICRLPGGGFAVGRFLAGRRGGEREVPVVYTEVDGGFSNGSLPRRISWASSSVSSSSSPSFPPPLQTSSLFLCNRAINITSQTSYHTQTLPPSKATSLLKLESSLGRYSDAWTQVSVQTPTKTLKPRGRWASTVGYEFCFSWNKSIGYRTWFIRVYPGPPSHARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQAHALAASGILGHTELRLHMPHSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPSALSLSEEEINALPVHKYKAVSSQNGNALVQQGSSSTSVEKNQDSTNPVGNTNATEDVLTCSVCLEQVNFGEVIRSLPCMHQYLFATKLKKHVNPSMKLYGEEAELLY 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31363028 31367734 + BLOR19935 Blo13g00883 69278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00883 555 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 448 535 IPR013083 -
Blo13g00883 555 Pfam Protein of unknown function (DUF1117) 162 247 IPR010543 -
Blo13g00883 555 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 326 531 - -
Blo13g00883 555 PANTHER TARGET OF ERK KINASE MPK-1 326 531 - -
Blo13g00883 555 MobiDBLite consensus disorder prediction 134 154 - -
Blo13g00883 555 SUPERFAMILY RING/U-box 507 530 - -
Blo13g00883 555 MobiDBLite consensus disorder prediction 476 499 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00116 Blo13g00883 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00883 Blo-Chr13:31363028 Blo09g00317 Blo-Chr9:13329653 4.17E-27 dispersed
Blo13g00883 Blo-Chr13:31363028 Blo13g01069 Blo-Chr13:32876584 6.32E-13 wgd
Blo13g00883 Blo-Chr13:31363028 Blo14g00112 Blo-Chr14:785546 1.05E-15 wgd
Blo13g00883 Blo-Chr13:31363028 Blo04g00269 Blo-Chr4:2035458 4.33E-13 wgd
Blo13g00883 Blo-Chr13:31363028 Blo04g00116 Blo-Chr4:963120 2.74E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00883 K16283 - vvi:100246103 301.982