Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00888 ATGAAATCTTTGAGCAGTGTCGGACTGGGTCTGAGTGTAGTGTTTGGCTGCCTTTTCTTTGCCCTCGTTGCAGAGCTCTACTATCTGCTATGGTGGAAAAAGAGGTTTACTGGGAGAGAGGTTGAAGATGATTACAGCAATCCGAGCAGAGAGCTTTTCTACATGTTTTGTTGCAGAAGTTCGTCTTCTTCCTTGAGTCGAAAAGCTTTCAATCCTCAAAATCTCGTCTCTCGTGAATCAGAAACTGAGTGTCAGATTCAGTCGAACAAAGATTTTCTGCCCAAACCATTTGGAGAAGAAGGGATTGAATCGGAGTTTTTGCGACTGCCTCCAAGATTTCTCTTCACCATCACCGAAGAAACAAAGGAAGATTTAGAGTCAGATGATGGAAAAGGGTCGAAAAGTAGAAGCTTGAGTGATTCGATTCTCGCCGTAGAAACTCCATTCTTGACTCCTCTAACTTCTCCGACTCTCTTCAGTCCAATGGATTCTTCTTACAATCATCACAAATTCAATCCTCTCTTCGAATCCGCATCGGACGCAGAGTTCAACAGAAAAAGATCGTCTCCCCCACCAAAATTCAAGTTCATGCAGGAAGCAGAAGAGAAACTCAGAAGAAAATTGATGGACGAAGATGAGAAACAGAAAAGCACTCGTAAAGACGAAGAAGAAAAGTCTTATATCACCATTGTTAATATCCTAGCTTCAAATTGGCAAGGTCAGCTTAACACCATTAAAGCTGATGGGAAAGGAAGTAAGCAGGACATCTACTCAACGAAGATAAAATACATCCTGAAGAGAGGAAAGCCATATATTTGGGTTCCTGAGAAAGATATGCATAATGTGAACACTATCATTGATGAGCGTGCTTCACTTGCTGTGACCAGTCCTTTCCCTGGTCCACTGGCTAGCTTACTCAGACTCATAAAAAAGTTACCGGCTCGGGTTGCACTGACTGGGGATATTATTCCTTTAAAGAATGAAAAGGCTCAAGTAATTACAGAAAAACTCAGAGACGCAATAATCTCCGAACAGAAAGCCATTAGCGAATTCAATTACACTGTTTCTGGTGTATTAAACTCTTCCGGTCTCGGCTGCATCTATCGAAATGAAAGCCTTGTGGAGTTAATGGACGAGCGTGAAAATTATGTGATATATAAATTTGATATAAGATCATGCATATTTATTGATGGTAACGGATGCAATCATGAAGTAGATGTAGAGGATATGAGCACAAGCAAAATAAATCCTATAGCGCCTTTTACTTCAAAGCTCATCGACGGGATTAACCGAAGCGGAGCCAGGAGGAAAGCCCTCATTCTCTTCTGCTTTTGTTACTTGGACGTGACTGCAAAGGACGCATGCATTCTTTCGATCGATCAAAAGGGATTCAACATACTCGGAAAGGTGCATGATCCGGCAACGAAGAACGGGTTTGGTCAATACGAATGGAAGGAATTCAGATTCGGATTCAAAGACGAGGTACGCGATCTTGAGACTTTCTGTGCTAAACTAGTCGAAATGGAGGAAGAAGCCGTCGGCAAAGTTTCGACCTCGACCGGTCTAGCATGA 1572 42.3 MKSLSSVGLGLSVVFGCLFFALVAELYYLLWWKKRFTGREVEDDYSNPSRELFYMFCCRSSSSSLSRKAFNPQNLVSRESETECQIQSNKDFLPKPFGEEGIESEFLRLPPRFLFTITEETKEDLESDDGKGSKSRSLSDSILAVETPFLTPLTSPTLFSPMDSSYNHHKFNPLFESASDAEFNRKRSSPPPKFKFMQEAEEKLRRKLMDEDEKQKSTRKDEEEKSYITIVNILASNWQGQLNTIKADGKGSKQDIYSTKIKYILKRGKPYIWVPEKDMHNVNTIIDERASLAVTSPFPGPLASLLRLIKKLPARVALTGDIIPLKNEKAQVITEKLRDAIISEQKAISEFNYTVSGVLNSSGLGCIYRNESLVELMDERENYVIYKFDIRSCIFIDGNGCNHEVDVEDMSTSKINPIAPFTSKLIDGINRSGARRKALILFCFCYLDVTAKDACILSIDQKGFNILGKVHDPATKNGFGQYEWKEFRFGFKDEVRDLETFCAKLVEMEEEAVGKVSTSTGLA 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31448761 31456839 - BLOR19940 Blo13g00888 69283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00888 523 Coils Coil 197 217 - -
Blo13g00888 523 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Blo13g00888 523 PANTHER EXPRESSED PROTEIN 225 522 - -
Blo13g00888 523 Gene3D - 212 410 IPR012349 -
Blo13g00888 523 SUPERFAMILY FMN-binding split barrel 230 512 - -
Blo13g00888 523 Gene3D - 416 520 IPR037119 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00888 Blo13g00761 CCT
Blo04g00104 Blo13g00888 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01305 Blo-Chr7:33328911 Blo13g00888 Blo-Chr13:31448761 5.11E-08 dispersed
Blo13g00888 Blo-Chr13:31448761 Blo13g00761 Blo-Chr13:30365111 4.32E-60 dispersed
Blo13g00888 Blo-Chr13:31448761 Blo13g01081 Blo-Chr13:32948466 9.74E-68 wgd
Blo13g00888 Blo-Chr13:31448761 Blo14g00122 Blo-Chr14:887251 6.78E-69 wgd
Blo13g00888 Blo-Chr13:31448761 Blo03g01239 Blo-Chr3:38621398 1.63E-31 wgd
Blo13g00888 Blo-Chr13:31448761 Blo04g00104 Blo-Chr4:896678 6.60E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00888 - - qlo:115955882 406.757