Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo13g00897 | ATGGCGTCGCTGCCTTATGCTGAGGTGGATTCGAGTTTACGAGCACTTGCTGGTCGCGCTGAAGGTTTTGGTCGTTTCGCCATTGGAGGGCTTCACGGACCTCTCTATTTTGTCAATAATTTGGCAGATGATGGCCCTGGATCACTTCGCGAAGGATGCCGCAGAAAAGAACCACTATGGATTCTTTTTGAGGTTTCAGACATAGACATTGATAGCAATCTACTTCCCATAAAATTGATTGAAACTTTTATATCATTTTTAGGTCTCAGTGTGTCATCTTACAAGACCATTGATGGTAGAGGGCAGAGAATAAAGCTCACTGGAAAGGGCCTTAGACTGAAGGAGTGTGAGCATATAATTATCTGCAACCTTGAATTTGAGGGGGGCAGAGGTCACGATGTTGATGGTATCCAAATAAAACCAAATTCTCGTCACATTTGGATTGACAGATGCAGCCTTCGTGACTATGATGATGGCTTAATCGATATCACTCGTCAAAGCACTGATATAACTGTGTCTAGATGTTATTTCTCACAACACGATAAGACCATGCTGATTGGAGCAGACGCTTCGCACGTTGGTGATAGATGCATTCGCGTGACGATTCATCATTGCTTCTTTGATGGAACGAGGCAGAGACACCCACGTGTTCGATTTGGAAAGGTTCATCTGTACAACAATTACACCAGAAACTGGGGTATATATGCTGTTTGCGCGAGCGTGGAATCCCAGTATTTGATAATTACGCATGTTGTTATTAAACTAATATACTCATCAGTATACTCTCAGTGCAACATATATGAAGCAGGACAGAAGAAGAAGACTTTTGAATTCTATACAGAGAAGGCGGCAGATAAAGAGGAAATGAAGTCTGGTTTAGTAAAATCTGAGGGAGACTTGTTTATAAATGGGGCTCAGCCATGCTCATTGATGATAGGCGTTGGAAAAGAATGCATATTTCATCCGAGTGAATTCTACCCAACTTGGACAATGGAATCAGCCTCGGATTCACTCAAATCCGTCCTCCAACTCTGCCCATTTTGCCAGAGGGTTCAGCTAACTTTGGAGGAGAAGAAAGTTCCTTATGAGCTGCTTCTCGTCAATCTCGCAGATAAACCTAAATGGTTCTTGGAGGTGAATCCAGAAGGGAAGGTGCCAGTGATTAAGCTCGATGAGAAATGGGTATCGGATTCTGATGTTATTGTTGGACTCCTGGAGGAGAAATACCCAGAACCTTCTCTCACTACTCCTCCTGAATTTGCCTCTGTGGGATCGAAGATATTTGGTGCTTTCTTTAGATTTCTTGTAAGCAAGGATCCCGAAGACGGATTGGAGCAGGCTTTACTAGATGAGGTTAAGGCATTGGATGATCATCTCAAGCAACACGGTCCGTATGTTGCCGGGGAGAAGATTACTGCAGTTGATCTGAGTTTGGCTCCTAAAATATACCATCTAGAGATTGCTCTTGGCTATTACAAGAAATGGACAGTTCCTGAAAACTTGACACATTTCCACAACTACAAACAGTTGCTCTTCTCCCGCGAATCGTTCGTGAAGACAAAGCCTGCCGAGGAGTATGTTATTGCTGGATGGGGGCCTAAGATGTCCAAGTTTCCTTTAATTGATGAATCTATACCTTAA | 1641 | 43.21 | MASLPYAEVDSSLRALAGRAEGFGRFAIGGLHGPLYFVNNLADDGPGSLREGCRRKEPLWILFEVSDIDIDSNLLPIKLIETFISFLGLSVSSYKTIDGRGQRIKLTGKGLRLKECEHIIICNLEFEGGRGHDVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFSQHDKTMLIGADASHVGDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQYLIITHVVIKLIYSSVYSQCNIYEAGQKKKTFEFYTEKAADKEEMKSGLVKSEGDLFINGAQPCSLMIGVGKECIFHPSEFYPTWTMESASDSLKSVLQLCPFCQRVQLTLEEKKVPYELLLVNLADKPKWFLEVNPEGKVPVIKLDEKWVSDSDVIVGLLEEKYPEPSLTTPPEFASVGSKIFGAFFRFLVSKDPEDGLEQALLDEVKALDDHLKQHGPYVAGEKITAVDLSLAPKIYHLEIALGYYKKWTVPENLTHFHNYKQLLFSRESFVKTKPAEEYVIAGWGPKMSKFPLIDESIP | 546 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 31509656 | 31516363 | - | BLOR19949 | Blo13g00897 | 69292 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo13g00897 | 546 | Pfam | Glutathione S-transferase, C-terminal domain | 444 | 507 | - | - | |
Blo13g00897 | 546 | Gene3D | - | 415 | 537 | - | - | |
Blo13g00897 | 546 | Pfam | Glutathione S-transferase, N-terminal domain | 344 | 412 | IPR004045 | - | |
Blo13g00897 | 546 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 335 | 413 | IPR004045 | - | |
Blo13g00897 | 546 | PANTHER | PECTATE LYASE | 1 | 354 | - | - | |
Blo13g00897 | 546 | Pfam | Pectate lyase | 90 | 232 | IPR002022 | - | |
Blo13g00897 | 546 | SUPERFAMILY | Pectin lyase-like | 17 | 308 | IPR011050 | - | |
Blo13g00897 | 546 | CDD | GST_C_DHAR | 414 | 534 | - | - | |
Blo13g00897 | 546 | SUPERFAMILY | Thioredoxin-like | 343 | 412 | IPR036249 | - | |
Blo13g00897 | 546 | SFLD | Main (cytGST) | 344 | 509 | - | - | |
Blo13g00897 | 546 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 391 | 538 | IPR010987 | - | |
Blo13g00897 | 546 | SUPERFAMILY | GST C-terminal domain-like | 408 | 533 | IPR036282 | - | |
Blo13g00897 | 546 | PANTHER | PECTATE LYASE 18-RELATED | 1 | 354 | IPR045032 | GO:0030570 | |
Blo13g00897 | 546 | SFLD | Glutathione Transferase (cytosolic) | 344 | 509 | IPR040079 | - | |
Blo13g00897 | 546 | CDD | GST_N_family | 345 | 402 | - | - | |
Blo13g00897 | 546 | Gene3D | - | 6 | 316 | IPR012334 | - | |
Blo13g00897 | 546 | Gene3D | Glutaredoxin | 330 | 414 | - | - | |
Blo13g00897 | 546 | PRINTS | Pollen allergen Amb family signature | 213 | 232 | IPR018082 | - | |
Blo13g00897 | 546 | PRINTS | Pollen allergen Amb family signature | 19 | 36 | IPR018082 | - | |
Blo13g00897 | 546 | PRINTS | Pollen allergen Amb family signature | 134 | 155 | IPR018082 | - | |
Blo13g00897 | 546 | SMART | amb_all | 60 | 273 | IPR002022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo13g00897 | Blo-Chr13:31509656 | Blo01g01002 | Blo-Chr1:29378370 | 1.95E-40 | dispersed | |
Blo18g00465 | Blo-Chr18:5336588 | Blo13g00897 | Blo-Chr13:31509656 | 2.65E-85 | transposed | |
Blo12g00441 | Blo-Chr12:21988055 | Blo13g00897 | Blo-Chr13:31509656 | 5.81E-164 | wgd | |
Blo13g00751 | Blo-Chr13:30279399 | Blo13g00897 | Blo-Chr13:31509656 | 1.56E-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo13g00897 | K01728 | - | csin:114270999 | 563.533 |