Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00923 ATGGCCATGGGTAAGGAAGTTTCTGCACAAGGATCGTTCTCGGCGAAGGACTACCACGACCCACCACCGGCGCCGCTCGTTGACGGGAAGGAGCTGGTGCAGTGGTCTTTCTACAGGGCGTTGATAGCGGAGTTTATAGCTACTTTGCTTTTTCTCTACGTCACTGTCTTGACTGTGATTGGGTATAACAGCCAGACCACGTCCGACCCATGCGGCGGCGTAGGCGTTCTAGGTATCGCATGGGCCTTCGGTGGCATGATCTTCGTTCTCGTCTACTGCACTGCTGGAATTTCAGGGGGTCACATAAACCCGGCGGTTACCTTCGGGCTGCTCTTGGCTCGAAAGGTGTCGCTGGTCCGAGCCGTGATGTACATAGTGGCTCAGTGTTTTGGAGCCATATGTGGAGTGGGGCTCGTTAAGTCCTTCCAAAAGGCTCATTACAGTAATCATGGAGGTGGAGCCAACCAGCTCGCCGATGGCTACAGCACAGGCGTGGGTCTGGGTGCAGAGATCATAGGCACCTTCGTTTTGGTCTACACAGTCTTCTCTGCCACTGATCCCAAAAGAAATGCTAGAGACTCCCACGTCCCGGTTTTGGCTCCGCTTCCGATCGGATTTGCCGTGTTCATGGTTCACTTGGCCACAATCCCAATCACCGGCACCGGAATCAACCCAGCTAGAAGTCTCGGAGCTGCTGTCGTCTACAATCAGAAAAACACTTGGGATGAGCAATGGATATTTTGGGTCGGACCCTTCATCGGAGCCGCCATTGCAGCGTTCTATCATCAGTTCATACTGAGGGCTGCCGCAGCCAAAGCTCTTGGGTCTTTCAGGAGCAATTCCCATGTCTGA 852 53.87 MAMGKEVSAQGSFSAKDYHDPPPAPLVDGKELVQWSFYRALIAEFIATLLFLYVTVLTVIGYNSQTTSDPCGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAVMYIVAQCFGAICGVGLVKSFQKAHYSNHGGGANQLADGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNQKNTWDEQWIFWVGPFIGAAIAAFYHQFILRAAAAKALGSFRSNSHV 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31718196 31719384 - BLOR19975 Blo13g00923 69318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00923 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 Gene3D Glycerol uptake facilitator protein. 24 283 IPR023271 -
Blo13g00923 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 280 IPR034294 -
Blo13g00923 283 CDD MIP 39 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 TIGRFAM MIP: MIP family channel proteins 43 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g00923 283 PANTHER AQUAPORIN PIP2-1 8 280 - -
Blo13g00923 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Blo13g00923 283 SUPERFAMILY Aquaporin-like 31 267 IPR023271 -
Blo13g00923 283 Pfam Major intrinsic protein 32 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01165 Blo-Chr1:42789605 Blo13g00923 Blo-Chr13:31718196 8.16E-138 dispersed
Blo12g00468 Blo-Chr12:22213838 Blo13g00923 Blo-Chr13:31718196 1.24E-107 transposed
Blo12g00467 Blo-Chr12:22213450 Blo13g00923 Blo-Chr13:31718196 1.31E-45 wgd
Blo13g00923 Blo-Chr13:31718196 Blo13g01118 Blo-Chr13:33303294 1.12E-172 wgd
Blo13g00923 Blo-Chr13:31718196 Blo14g00177 Blo-Chr14:1386783 7.13E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00923 K09872 - sspl:121783283 496.508