Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00924 ATGGATTTCATGAACGAAGAAAGCAAGAGCTCGGAGAAGTATTTAGATTCTCAGCTATGGCATGCTTGTGCCGGTGGAATGGTTGAAATCCCACCCGTCAATTCAAAAGTCTTCTACTTTCCTCAAGGCCACGCAGAACAGGCCGATGTAGAGCTGGATTTCAAAACCCATAAAATTCCACCTCTGGTTCTTAGCAGAGTTTCTGCAATTCGATTCATGGCGGATTCGGAAACTGACGAGGTTTTCGCTGAAATTAGTTTGCTTCCTTTGAGCAGTAATGATTTTGAAAGAGAAGCAGACGATTGGATTGGGGGATACAACCAAAGTGAGAGTGAAGATAAGAATAATTCCTTCGCTAAAACTTTGACTCAATCTGATGCCAACAATGGCGGTGGATTTTCCGTCCCTCGCTATTGTGCCGAAACAATCTTCCCGCCTTTGAACTACTCCGCCAATCCGCCCGTTCAAACTATCGACGTCAAAGATGTTCACGGCCAGATTTGGAAGTTTAGGCATATTTATCGGGGGACTCCTCGGCGCCACCTTCTGACGACCGGATGGACTAATTTCGTGAATTACAAAAAGCTCGTGGCCGGAGATTCGATCGTGTTTTTAAAAGCCGAGAGTGGGGAGCTCCGGATCGGAATAAGGAAGGCCAAGAGGGGAATCGGAGGGCAGTTTGATTGCTCAAGTGGCTACTCGAGAGGAAGAGTGAGTCCCAATTCGATAATTGAATCGGCAAATCTTGCAGCGAGAGGACACGCCTTTGTGGTGAAGTATTTTCCGCGCTCGAACAAGCCCCCATTTTTCGTTGGGGCCGGTGCAGTGAGGGCTGCAATGCGAGTCCGATGGTCGGCCGGAATGAGACTCAAGATGGCTTTTGAAACAGAGGACTCGTCTAGAATTAGTTGGTTTATGGGAACTATATCTTCCATCCAAGTCTCCGATCCCGTCCGGTGGCCGGATTCTCCTTGGAGGCTTCTTCAGGTGACATGGGACGAGCCGGACTTATTACAAAATGTGAAGTTCGTCAATCCATGGTCGGTCGAGGCGGTGACAAACATGTTACCTTATCACATCTCCCCTTTTGGGTCATTAGCAAAAAAACCAAAGCTTCTACCGATCCCGACACTTCCGTCCGACTTCGTCAGGCCGGTGAGCGATTTTCCGGGAATGTTAAACGTCACTCTTGCAGGCATTCAGGGAGCCAGGCACGCTCAATCCACACTCTCTTCGTTGAATCTAAGCAAGTTTCAAGCTACCAATCTTCCAACGATCCCGAACAACAACTCTCCGGCCCGATGCAGAAAATCCGAGTGGCGAAACTCGAAAAATCCGTCCAAAATTTCGAAAGAAAAAGAGCTAAAAACACCACACATCTTATTGTTTGGACAAGTCATCCTTCTTGACCAAAATGTTCCGAAGGATAACCCCGTAGACACTCCCGGAAATAGTTCGTCGGAAAAGACAGACACCTCCGATGGCGTAGGACCATCACCGCCATGGACTAATTCGCCGGAAAATTTATCAGATGCAGGGTCTCTGTGGTGTAAAGATCACCGGAAAACTGTTATCGATCTCAAGACCGGCCATTGCAAGGAGTTGGGCGATCAAATTTTCTTAGTACGCGATCATTTTTCAGTTCCTTAA 1650 47.64 MDFMNEESKSSEKYLDSQLWHACAGGMVEIPPVNSKVFYFPQGHAEQADVELDFKTHKIPPLVLSRVSAIRFMADSETDEVFAEISLLPLSSNDFEREADDWIGGYNQSESEDKNNSFAKTLTQSDANNGGGFSVPRYCAETIFPPLNYSANPPVQTIDVKDVHGQIWKFRHIYRGTPRRHLLTTGWTNFVNYKKLVAGDSIVFLKAESGELRIGIRKAKRGIGGQFDCSSGYSRGRVSPNSIIESANLAARGHAFVVKYFPRSNKPPFFVGAGAVRAAMRVRWSAGMRLKMAFETEDSSRISWFMGTISSIQVSDPVRWPDSPWRLLQVTWDEPDLLQNVKFVNPWSVEAVTNMLPYHISPFGSLAKKPKLLPIPTLPSDFVRPVSDFPGMLNVTLAGIQGARHAQSTLSSLNLSKFQATNLPTIPNNNSPARCRKSEWRNSKNPSKISKEKELKTPHILLFGQVILLDQNVPKDNPVDTPGNSSSEKTDTSDGVGPSPPWTNSPENLSDAGSLWCKDHRKTVIDLKTGHCKELGDQIFLVRDHFSVP 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31721951 31723686 - BLOR19976 Blo13g00924 69319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00924 549 Gene3D - 116 219 IPR015300 -
Blo13g00924 549 MobiDBLite consensus disorder prediction 477 507 - -
Blo13g00924 549 Pfam Auxin response factor 247 329 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo13g00924 549 CDD B3_DNA 117 218 IPR003340 GO:0003677
Blo13g00924 549 Gene3D - 283 356 - -
Blo13g00924 549 SMART B3_2 118 220 IPR003340 GO:0003677
Blo13g00924 549 Pfam B3 DNA binding domain 118 219 IPR003340 GO:0003677
Blo13g00924 549 MobiDBLite consensus disorder prediction 424 451 - -
Blo13g00924 549 PANTHER AUXIN RESPONSE FACTOR 16 7 495 - -
Blo13g00924 549 SUPERFAMILY DNA-binding pseudobarrel domain 111 222 IPR015300 -
Blo13g00924 549 MobiDBLite consensus disorder prediction 473 507 - -
Blo13g00924 549 MobiDBLite consensus disorder prediction 437 451 - -
Blo13g00924 549 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 495 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo13g00924 549 ProSiteProfiles B3 DNA-binding domain profile. 118 220 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00070 Blo13g00924 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01167 Blo-Chr1:42834256 Blo13g00924 Blo-Chr13:31721951 0 dispersed
Blo13g00924 Blo-Chr13:31721951 Blo18g00211 Blo-Chr18:2065513 7.43E-107 dispersed
Blo12g00469 Blo-Chr12:22231390 Blo13g00924 Blo-Chr13:31721951 7.32E-176 wgd
Blo13g00924 Blo-Chr13:31721951 Blo14g00180 Blo-Chr14:1411907 2.70E-171 wgd
Blo13g00924 Blo-Chr13:31721951 Blo04g00070 Blo-Chr4:598266 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13186 PF02362 B3 1.00E-20 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00924 - - cit:102611587 550.051