Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00978 ATGGCACACAAAACCTTCGTAAGGGAAAGGGAAAGGGAAATGGAAATGGAATTGGATGATCTTTTTGAGACTGCAACAGGCGAGGAAATCATGGAAGCTACTTCAGGAGACGAACAAGATCCTGATCAACCTCCCAGAAAGAAGCGTTACAATCGTCATACCCAACTTCAAATTCAGGAAATGGAAGCTTTTTTCAAGAAATGTCCTCACCCTGATGAGAAGAAAAGGAAGGAGTTGGGTCGTCAGCTAGGTCTGAAACCTTTGCAGGTCAAATTTTGGTTCCAGAATAAGCGCACCCAGATGAAGGCCCAACATGAACGCCATGAGAACGCTATTTTGAAAGCCGAGAATGAAAAGTTTCGCGCCGAGAACAAAAGGTACATGGAGGCTTTCAGCAATGCCTCATGCCCCAACTGCGGAGGCCCGGCTGCTATGGGTGAGATGTCGTTTGACGACCATCATTTAAGGATTGAAAATGTCCGTCTACGAGAAGAGGTTGATAAAATGGCTCCTAAATACGTAGGCAGACCGTTTGCCTCGTATAACCACAGCCAATCTGATGTTGGAGTTGGTGGTTTTCGTGGGAATTCAGGCTACGTGTACGGAGCAAACGAACTTGTCATGCCGATGTCCAGGCCTACGGAGGCTGATAAGCCTGTGATAGTCGAGCTTGCTGTTGCAGCTATGGAAGAGCTAGTCAGCATGGCTGAAAAGGGACAGCCTTTGTGGATACCAGCTGGTGATAATGCCTCGGAGATACTGAATGAAGAAGAATATCTCAAGCTTTTCCCAAGAGAAATTTGCTCAAAACCTTTGGGCTTAAGAACTGAAGCTTCACGGCAATCGGCAGTCGTCATCATGAACCACATTAAGCTCATTGAGATTTTCATGGACGTGGATAAATGGTCAACTGTATTTTGTGGTATTGTTTCAAGAGCACTTCTCCTGGAAGTCCTATCAACTGGAGTTGCTGGAAACCGAAATGGAGCCCTACAAGTGATCACAGCTGAATTCCAGGTCCCTACGCCGCTAGTTCCGACCAGGGAAAATTACATGGTGAGGTACTGCAAGAAGCATGGAGATGGGACTTGGGCTATCGTCGACGTTTCGCTCGATACTTTACACCCAACCTCTATGCCAAAGATCAGTCGAAGAAGACCATCTGGATGCTTGATCCAAGAACTTCCAAATGGCTTCTCCAAGGTGACGTGGGTCGAACACGCAGAAGAAGATATCAGAGCCGTTCATAATCTCTACCAATCACTTGTTAGTTCTGGGCTTGCTTTTGGAGCCAAACGATGGGTGGCCACGTTAGATCGACAGTGCGAGCGTCTCGCAAGCTCCATGGCCAACGCCATCGCTGCTGGAGATTTACGCATATTAACAAACCCAGAAGGGAGGAAGAGCATGGTGAAGCTGGCAGAGAGAATGGTGATGACCTTCTGCAGTGGGGTGGGTGCTTCAACAGCTCACGCATGGACAACGTTGCCTGCGATTGGCTCGGACGATGTTAGAGTCATGTCTAGGAAGAGCACTGATGGTTCAGGAAGGCCTCTCGGCATTGTTCTAAGCGCTGTCACTTCCTTCTGGATGCCAGTTCCACCTCAAAGAGTTTTCGATTTCCTTCGAAATTATAACTCAAGAAACCAGTGGGATATTCTATCAAACGGGGGCCTAGTTCAAGAGATGGCATACATTTCCAATGGTCGTCACGCTGGAAACTGCGTCTCCCTACTGCGAGTCAACAGCGCAAACTCAAGCCAGAGCAACATGCTGATTTTACAAGAAAGCTGCACGGATTCAACAGGGTGTTACGTCATTTATGCCCCAGTTGATATTGCTGCCATGAATGTGGTCTTAAATGGAGGCGACCCAGATTATTCAGCGCTTCTTCCTTCAGGATTTGCCATTCTTCCTGACGGGGCTGGACGTGCCGTAGATGGTGTTATTGAGGTCGGGTCCGGTGGCTCTTTGCTGACAGTGGCATTTCAAATTTTGGTCGATTCCGTCCCAACGTCCAAGATTTCTCTTGGATCGATTGCTACTGTGAACAGTCTTATTAAATGCACTGTTCAAAGGATCAGGGCTGCTGTCACAAGCGAGAATCCATAA 2112 47.68 MAHKTFVREREREMEMELDDLFETATGEEIMEATSGDEQDPDQPPRKKRYNRHTQLQIQEMEAFFKKCPHPDEKKRKELGRQLGLKPLQVKFWFQNKRTQMKAQHERHENAILKAENEKFRAENKRYMEAFSNASCPNCGGPAAMGEMSFDDHHLRIENVRLREEVDKMAPKYVGRPFASYNHSQSDVGVGGFRGNSGYVYGANELVMPMSRPTEADKPVIVELAVAAMEELVSMAEKGQPLWIPAGDNASEILNEEEYLKLFPREICSKPLGLRTEASRQSAVVIMNHIKLIEIFMDVDKWSTVFCGIVSRALLLEVLSTGVAGNRNGALQVITAEFQVPTPLVPTRENYMVRYCKKHGDGTWAIVDVSLDTLHPTSMPKISRRRPSGCLIQELPNGFSKVTWVEHAEEDIRAVHNLYQSLVSSGLAFGAKRWVATLDRQCERLASSMANAIAAGDLRILTNPEGRKSMVKLAERMVMTFCSGVGASTAHAWTTLPAIGSDDVRVMSRKSTDGSGRPLGIVLSAVTSFWMPVPPQRVFDFLRNYNSRNQWDILSNGGLVQEMAYISNGRHAGNCVSLLRVNSANSSQSNMLILQESCTDSTGCYVIYAPVDIAAMNVVLNGGDPDYSALLPSGFAILPDGAGRAVDGVIEVGSGGSLLTVAFQILVDSVPTSKISLGSIATVNSLIKCTVQRIRAAVTSENP 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32217182 32220137 + BLOR20030 Blo13g00978 69373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00978 703 SMART HOX_1 45 108 IPR001356 GO:0003677
Blo13g00978 703 ProSiteProfiles START domain profile. 214 447 IPR002913 GO:0008289
Blo13g00978 703 Gene3D - 32 119 - -
Blo13g00978 703 Pfam Homeodomain 47 102 IPR001356 GO:0003677
Blo13g00978 703 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN-RELATED 10 700 - -
Blo13g00978 703 Coils Coil 98 130 - -
Blo13g00978 703 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
Blo13g00978 703 CDD homeodomain 46 105 IPR001356 GO:0003677
Blo13g00978 703 SMART START_1 223 444 IPR002913 GO:0008289
Blo13g00978 703 CDD START_ArGLABRA2_like 218 443 - -
Blo13g00978 703 SUPERFAMILY Bet v1-like 463 695 - -
Blo13g00978 703 Pfam START domain 224 444 IPR002913 GO:0008289
Blo13g00978 703 Gene3D - 228 447 IPR023393 -
Blo13g00978 703 SUPERFAMILY Homeodomain-like 35 104 IPR009057 -
Blo13g00978 703 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 10 700 IPR042160 -
Blo13g00978 703 MobiDBLite consensus disorder prediction 27 49 - -
Blo13g00978 703 SUPERFAMILY Bet v1-like 214 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00112 Blo-Chr2:830731 Blo13g00978 Blo-Chr13:32217182 0 dispersed
Blo04g00662 Blo-Chr4:5933898 Blo13g00978 Blo-Chr13:32217182 0 dispersed
Blo13g00978 Blo-Chr13:32217182 Blo15g00036 Blo-Chr15:291196 0 dispersed
Blo14g00450 Blo-Chr14:5329294 Blo13g00978 Blo-Chr13:32217182 1.82E-25 dispersed
Blo13g00978 Blo-Chr13:32217182 Blo15g00501 Blo-Chr15:8462599 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13196 PF01852 START 1.60E-47 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00978 K09338 - qsu:112016283 1054.66