Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00989 ATGGACAAACCATGGGGTCTTACCCTTCCTGATTCAGAATCCATCTCCCCCTTTCTCAACAAACCTCCTCCTTCTACTCCTTCCTTTTCGCACCTTCACCAACACCCTGTCCCTAACTCCCCTTTCATGTTCGCCGGTATTCAATTTCCACTGAAGCTCTCCCGCCTTGAAGAAGAAGAAGCGCACCCGCCCTCACGTCAGAATCCCATGCCATTAGACGAGGTCGATTTCTTCTCTGATAAGAAAACGGTGGTTGACGACCACCGGGACCATGATAACTATCGTAAATTCGCCAAAGTCACAGTCAAAACAGAAAAGGACAACTCCGACAGACCGCCGTCCGACTCGGATGTAAATACTGGATTACACCTCCTAATTGCCAACACTGGAAGCGATCAGTCTACGGTGGACGATGGGATCTCATCGGAGAGCCATCACCGCCATAAGCGAGCTAAAAATGAGCTGGTTCAATTGCAAGTGGAACTTGAACGGATGAATTCAGAGAATCAAAAGTTGAGAGAAATGCTCACCCAGGTTACCAACAACTACAACGCTCTACACATGCATCTCTTGGCTGTAATGCAACAGCAACACACCGACCTCCCTCCTGAAATTGGAAAACAACAACGAAATCTGATTGTAGAAGAGGAACCGGGTGAGAAAAAGGAAGTTCCGGTGGGAAGAGCTGCCGTGCAAAGGCAGTTCATGGATCTTGGAACCGGTGCGGCAGATGATCAAATTTCTCAGTCTTTATCTGATGAAAGAACGGTTTCTGGGTCGTCTCTGAACCAAGCAGAAGGTGGGGATTTAAAGAGAATCATAAATGAGATTGGTCCACAACAGTCTAATGGGAGGGCATGGAAAAGAAGGGAAGGCAGCCCTGATTCAAATTGTTACGGTCCTAATAAATTGAACTCTGCCAAACCACTTGACAACCCGACGACTGAGGCCACCATGAGGAAAGCCCGAGTCTCAGTTCGAGCTCGATCTGAAGCGCCTATGATAAACGACGGATGCCAATGGAGAAAGTATGGGCAGAAAATGGCGAAAGGAAACCCATGTCCTCGGGCTTATTATAGATGCACTATGGCAGTCGGATGTCCAGTTCGAAAACAAGCTCAACGCTGCGCTGAAGATCGGACAATTTTGATAACCACGTACGAAGGAAACCATAATCACCCTCTCCCACCAGCTGCTATGGCTATGGCTTCCACCACAACTGCGGCTGCTACCATGCTACTTTCTGGGTCGATGCCAAGCGGAGATGGCTTAATGAACCAGAATTTACTCGCAAGGGCTATTCTTCCTTGCTCATCAAACATGGCTACAATTTCAGCTTCTGCTCCATTTCCGACTGTCACCTTAGACCTCACTCACTCACCAAGCAACCCAATCCAAAGGCCTCCCGCCACCCAGCTCCACCTCCCATTTCCGGGACACCCTCATCAAATCCCTCCTCCGGTTTTCAGTCAACCGCTGTACAACCAATCTCAGCTCTCCGGTCTTCAGCTCTCCGGCCATGAAGTCGGTTCTTCTCGGTTATCCCACCAAACTCTATTGCACCAGGCTCTTCCAGCTCCTTCATATTCCGACTCATTGAGTGCTGCCACAGCTGCCATTGCGGCTGATCCAAACTTCACCGCCGCCCTTGCCGCGGCCATAAGCTCCATCATTGGTGGCTCTCAGTCAAGCAATGGGCACACAAATAACGCTTCAAGCAACAGCAACCAGAAAGTTAATAGCCACGCAGGAACGTAG 1758 49.49 MDKPWGLTLPDSESISPFLNKPPPSTPSFSHLHQHPVPNSPFMFAGIQFPLKLSRLEEEEAHPPSRQNPMPLDEVDFFSDKKTVVDDHRDHDNYRKFAKVTVKTEKDNSDRPPSDSDVNTGLHLLIANTGSDQSTVDDGISSESHHRHKRAKNELVQLQVELERMNSENQKLREMLTQVTNNYNALHMHLLAVMQQQHTDLPPEIGKQQRNLIVEEEPGEKKEVPVGRAAVQRQFMDLGTGAADDQISQSLSDERTVSGSSLNQAEGGDLKRIINEIGPQQSNGRAWKRREGSPDSNCYGPNKLNSAKPLDNPTTEATMRKARVSVRARSEAPMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQAQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTTAAATMLLSGSMPSGDGLMNQNLLARAILPCSSNMATISASAPFPTVTLDLTHSPSNPIQRPPATQLHLPFPGHPHQIPPPVFSQPLYNQSQLSGLQLSGHEVGSSRLSHQTLLHQALPAPSYSDSLSAATAAIAADPNFTAALAAAISSIIGGSQSSNGHTNNASSNSNQKVNSHAGT 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32292306 32294495 - BLOR20041 Blo13g00989 69384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00989 585 MobiDBLite consensus disorder prediction 562 585 - -
Blo13g00989 585 Coils Coil 148 182 - -
Blo13g00989 585 PANTHER WRKY TRANSCRIPTION FACTOR 6 47 571 - -
Blo13g00989 585 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 571 IPR044810 GO:0003700
Blo13g00989 585 MobiDBLite consensus disorder prediction 279 313 - -
Blo13g00989 585 MobiDBLite consensus disorder prediction 458 492 - -
Blo13g00989 585 Gene3D WRKY domain 320 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00989 585 SMART WRKY_cls 335 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00989 585 MobiDBLite consensus disorder prediction 131 150 - -
Blo13g00989 585 SUPERFAMILY WRKY DNA-binding domain 328 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo13g00989 585 Pfam WRKY DNA -binding domain 336 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00989 585 MobiDBLite consensus disorder prediction 13 34 - -
Blo13g00989 585 ProSiteProfiles WRKY domain profile. 330 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo13g00989 585 MobiDBLite consensus disorder prediction 298 313 - -
Blo13g00989 585 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00989 Blo-Chr13:32292306 Blo15g00484 Blo-Chr15:7923766 1.86E-130 dispersed
Blo13g00989 Blo-Chr13:32292306 Blo14g00014 Blo-Chr14:93891 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13197 PF03106 WRKY 7.30E-23 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00989 - - mcha:111012275 551.977