Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00991 ATGCGCCTAGCCTCATCTGACCTCGCTTCTAGAATACAGCTGACTACGCTGCCGACTGTTGTAATGGCTGTGAAACTTGAGTTTCGTTCTCTCTCTCCAACTGCGAGGCTCATTGTGCTTTTATTTATCTCGTTGATCTCTGCTTCCCGCTATGCTTTGGCCATTACTGACCCTTCCGATGTTCAAGCCCTGCAAGCAATGTACAGCTCATTGAATAGTTCTCCTGAGCTCATTGGTTGGAAAAGTAGCGGCGGTGATCCCTGTGCAGAGTCATGGAAAGGGATAACCTGTGCGGGCTCAGGTGTTGTTTCCATTGACGTTTCTGGGTTAAGACTCAATGGAACAATGGGATATGAGCTGGCAAGCCTATTCTCATTGAAGAAACTTGATATGAGCAAGAATAATATCCACGATTCGATCCCTTATCAGTTGCCTCCAAATCTCACATCCATGAATATTAGTCATAATTCCCTCGGCCAGTCGATTGGCGATGTCTTCGCCAACCTTGCCAACCTTTCAACCTTAGATCTTTCTTTCAACAACTTTTCAGGGAATCTTCCTAATTCTTTCAGTTCACTGTCCAATCTTTCTTCACTCTCTTTGGAGAATAATCAATTGACTGGTTCTCTTGACATGCTCATAAGCTTACCTTTGAAAACTCTATATGGCGGAAATTCGTTTGCTAATGCCCCACCTCTGCCACCATCTGGCACACCACCTTCAGGAAGACCTGGTAACAATCCAAAACCTGCTGGATCCAGTGCACCGCCTTCTGAAGCTGGTGGCTTGGCAATTGGGGCAATAATAGGCATAATTGCGGGGACTGTGGTTGTTTCACTCATTCTTCTACTTATACTCGTCATCTGCATACGGAAGAATAAAAAGAAGAAAGCAGGTCCAAAGACTTCCAGCGGACGTCTCTCTGTTGGGTCAAACATTGTTACTGCTGTTGCACAAGAGCAGAGGATCAAGAGCGTGGCAGCTGTTGCCGATCTGAAGCCCCCTCCTGCAGATAAACTGACGGTGGATAGTTTACACGGGAAAAACGGATCTGTCAAGAGAATAAAGTCTCCCATTACAGCCACTTCCTATGCTGTTGCTTCTCTCCAAACAGCCACAAACAGCTTTAGCCAAGAATATCTGATTGGTGAAGGCTCACTCGGCCGTGTCTACAGAGCTGACTTCCCTAATGGAAAGACGATGGCGATTAAAAAGGTCGACAATGCAGCACTATCACTGCAGGAGGAAGATAATTTTCTCGAATCAGTCTCGAATATGTCGAGACTGAGGCATCCGAACATTGTAACACTCATCGGATATTGCGCAGAGCATGGACAACGTCTTCTCGTCTTTGAATATTTTGGAAATGGTAGTCTTCATGACATGCTTCATTATACCGAAGATGGCTGTAAGACCCTCAGTTGGAATTCTCGCGTTAGAGTTGCCCTCGGCACTGCACGCGCTCTAGAGTATCTTCACGAGGTGTGTTTACCGTGTATTGTACATAGAAATTTCAAGTCAGCAAACATATTACTTGATGAGGAGCTGAATCCCCACTTGTCAGATTGTGGCTTAGCTGCTTTAACACCCAACACCGAGCGGCAAGTGTCAACTCAGCTAGTTGGATCGTTTGGTTATAGTGCTCCCGAATTTGCCCTGTCCGGATTATACACCGTCAAAAGCGACGTATACAGCTTCGGGGTAGTGATGTTAGAGCTACTCACTGGTCGGAAACCTCTGGATAGTTCAAGATCGAGATCAGAACAATCACTCGTGCGATGGGCGACTCCTCAACTTCATGATATAGACGCCTTGGCGAAAATGGTAGATCCGGCCCTGAATGGGATGTACCCTGCAAAATCTCTCTCTCGATTTGCAGACATTATTGCCCTGTGTGTCCAGGCGGAGCCAGAATTTCGGCCTCCCATGTCTGAAGTAGTTCAGGCATTGGTCCGGTTAGTTCAAAGGGCAACTGTCACCAAAAGGCATCCCAGCGATGAAGCCGGATTCACATACAAGACCCCAGATCACGAGGCAACAATAGATGCCTCCTTCTAA 2058 46.6 MRLASSDLASRIQLTTLPTVVMAVKLEFRSLSPTARLIVLLFISLISASRYALAITDPSDVQALQAMYSSLNSSPELIGWKSSGGDPCAESWKGITCAGSGVVSIDVSGLRLNGTMGYELASLFSLKKLDMSKNNIHDSIPYQLPPNLTSMNISHNSLGQSIGDVFANLANLSTLDLSFNNFSGNLPNSFSSLSNLSSLSLENNQLTGSLDMLISLPLKTLYGGNSFANAPPLPPSGTPPSGRPGNNPKPAGSSAPPSEAGGLAIGAIIGIIAGTVVVSLILLLILVICIRKNKKKKAGPKTSSGRLSVGSNIVTAVAQEQRIKSVAAVADLKPPPADKLTVDSLHGKNGSVKRIKSPITATSYAVASLQTATNSFSQEYLIGEGSLGRVYRADFPNGKTMAIKKVDNAALSLQEEDNFLESVSNMSRLRHPNIVTLIGYCAEHGQRLLVFEYFGNGSLHDMLHYTEDGCKTLSWNSRVRVALGTARALEYLHEVCLPCIVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQLVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLTGRKPLDSSRSRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQAEPEFRPPMSEVVQALVRLVQRATVTKRHPSDEAGFTYKTPDHEATIDASF 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32330973 32334854 + BLOR20043 Blo13g00991 69386

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00991 685 Pfam Leucine rich repeat 146 206 IPR001611 GO:0005515
Blo13g00991 685 MobiDBLite consensus disorder prediction 229 257 - -
Blo13g00991 685 Gene3D Ribonuclease Inhibitor 56 232 IPR032675 -
Blo13g00991 685 PANTHER OS01G0253100 PROTEIN 54 160 IPR045271 GO:0004714|GO:0006468
Blo13g00991 685 PANTHER OS01G0253100 PROTEIN 162 680 IPR045271 GO:0004714|GO:0006468
Blo13g00991 685 SUPERFAMILY L domain-like 56 217 - -
Blo13g00991 685 Gene3D Transferase(Phosphotransferase) domain 1 455 677 - -
Blo13g00991 685 Gene3D Phosphorylase Kinase; domain 1 339 453 - -
Blo13g00991 685 MobiDBLite consensus disorder prediction 232 246 - -
Blo13g00991 685 CDD STKc_IRAK 382 653 - -
Blo13g00991 685 ProSiteProfiles Protein kinase domain profile. 376 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00991 685 SUPERFAMILY Protein kinase-like (PK-like) 356 650 IPR011009 -
Blo13g00991 685 Pfam Protein kinase domain 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g00991 685 ProSiteProfiles Leucine-rich repeat profile. 195 217 IPR001611 GO:0005515
Blo13g00991 685 Pfam Leucine rich repeat N-terminal domain 58 97 IPR013210 -
Blo13g00991 685 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 54 160 - -
Blo13g00991 685 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 162 680 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00991 - - - mnt:21397310 894.034
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00016 Blo-Chr5:158546 Blo13g00991 Blo-Chr13:32330973 3.93E-145 dispersed
Blo09g00427 Blo-Chr9:15243225 Blo13g00991 Blo-Chr13:32330973 3.75E-102 dispersed
Blo12g00615 Blo-Chr12:24422904 Blo13g00991 Blo-Chr13:32330973 9.46E-86 dispersed
Blo13g00991 Blo-Chr13:32330973 Blo15g00549 Blo-Chr15:10661309 4.35E-155 dispersed
Blo13g00991 Blo-Chr13:32330973 Blo14g00015 Blo-Chr14:108837 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo15g00549 . 31 753 Strubbelig Receptor Gene Family AT4G03390 62.9 6.2e-211 731.1
Blo02g00087 . 39 765 Strubbelig Receptor Gene Family AT4G03390 56.8 2.0e-180 629.8
Blo07g00813 . 365 657 Strubbelig Receptor Gene Family AT4G03390 57.7 3.1e-93 340.1
Blo14g00015 . 95 385 Strubbelig Receptor Gene Family AT4G03390 58.5 1.5e-92 337.8
Blo09g00427 . 113 787 Strubbelig Receptor Gene Family AT5G06820 51.2 1.4e-164 577.0
Blo10g00929 . 21 677 Strubbelig Receptor Gene Family AT1G78980 59.5 8.1e-186 647.5
Blo05g00016 CCT 251 556 Strubbelig Receptor Gene Family AT1G78980 60.9 9.5e-102 368.2
Blo14g00015 . 92 399 Strubbelig Receptor Gene Family AT1G78980 54.3 2.0e-91 334.0
Blo15g00549 . 27 627 Strubbelig Receptor Gene Family AT2G20850 51.0 9.1e-131 464.5
Blo14g00015 . 91 259 Strubbelig Receptor Gene Family AT2G20850 56.8 2.5e-51 200.7
Blo10g00929 . 20 660 Strubbelig Receptor Gene Family AT3G13065 50.3 7.3e-139 491.5
Blo05g00016 CCT 248 539 Strubbelig Receptor Gene Family AT3G13065 59.7 1.4e-97 354.4
Blo14g00015 . 94 382 Strubbelig Receptor Gene Family AT3G13065 51.5 4.8e-82 302.8
Blo13g00991 . 361 654 Strubbelig Receptor Gene Family AT1G11130 53.1 3.0e-84 310.1
Blo10g00947 CCT 1604 1898 Strubbelig Receptor Gene Family AT1G11130 52.0 2.0e-83 307.4
Blo07g00813 . 369 651 Strubbelig Receptor Gene Family AT1G11130 51.6 7.0e-81 298.9
Blo14g00015 . 86 382 Strubbelig Receptor Gene Family AT1G11130 51.5 5.9e-80 295.8
Blo15g00549 . 27 627 Strubbelig Receptor Gene Family AT2G20850 51.0 9.1e-131 464.5
Blo14g00015 . 91 259 Strubbelig Receptor Gene Family AT2G20850 56.8 2.5e-51 200.7
Blo09g00427 . 113 787 Strubbelig Receptor Gene Family AT5G06820 51.2 1.4e-164 577.0
Blo15g00549 . 31 753 Strubbelig Receptor Gene Family AT4G03390 62.9 6.2e-211 731.1
Blo02g00087 . 39 765 Strubbelig Receptor Gene Family AT4G03390 56.8 2.0e-180 629.8
Blo07g00813 . 365 657 Strubbelig Receptor Gene Family AT4G03390 57.7 3.1e-93 340.1
Blo14g00015 . 95 385 Strubbelig Receptor Gene Family AT4G03390 58.5 1.5e-92 337.8
Blo10g00929 . 20 660 Strubbelig Receptor Gene Family AT3G13065 50.3 7.3e-139 491.5
Blo05g00016 CCT 248 539 Strubbelig Receptor Gene Family AT3G13065 59.7 1.4e-97 354.4
Blo14g00015 . 94 382 Strubbelig Receptor Gene Family AT3G13065 51.5 4.8e-82 302.8
Blo10g00929 . 21 677 Strubbelig Receptor Gene Family AT1G78980 59.5 8.1e-186 647.5
Blo05g00016 CCT 251 556 Strubbelig Receptor Gene Family AT1G78980 60.9 9.5e-102 368.2
Blo14g00015 . 92 399 Strubbelig Receptor Gene Family AT1G78980 54.3 2.0e-91 334.0
Blo10g00947 CCT 1224 1913 Strubbelig Receptor Gene Family AT1G53730 59.2 2.1e-192 669.5
Blo07g00813 . 1 666 Strubbelig Receptor Gene Family AT1G53730 59.8 1.3e-178 623.6
Blo05g00016 CCT 169 550 Strubbelig Receptor Gene Family AT1G53730 72.1 6.7e-151 531.6
Blo13g00991 . 50 677 Strubbelig Receptor Gene Family AT1G53730 50.3 2.6e-142 503.1
Blo14g00015 . 68 385 Strubbelig Receptor Gene Family AT1G53730 58.9 1.2e-102 371.3
Blo10g00947 CCT 1236 1918 Strubbelig Receptor Gene Family AT3G14350 59.2 1.7e-180 629.8
Blo05g00016 CCT 169 550 Strubbelig Receptor Gene Family AT3G14350 63.8 9.3e-126 448.0
Blo14g00015 . 89 385 Strubbelig Receptor Gene Family AT3G14350 56.9 1.5e-86 317.8
Blo13g00991 . 147 685 Strubbelig Receptor Gene Family AT4G22130 61.4 5.8e-174 607.8
Blo14g00015 . 55 407 Strubbelig Receptor Gene Family AT4G22130 72.1 5.4e-148 521.5
Blo10g00947 CCT 1610 1929 Strubbelig Receptor Gene Family AT4G22130 61.7 3.9e-114 409.1
Blo05g00016 CCT 245 565 Strubbelig Receptor Gene Family AT4G22130 62.3 6.7e-114 408.3
Blo07g00813 . 347 670 Strubbelig Receptor Gene Family AT4G22130 62.5 1.1e-113 407.5
Blo10g00929 . 346 675 Strubbelig Receptor Gene Family AT4G22130 54.4 3.1e-103 372.9
Blo15g00549 . 440 745 Strubbelig Receptor Gene Family AT4G22130 57.7 1.1e-97 354.4
Blo02g00087 . 472 765 Strubbelig Receptor Gene Family AT4G22130 54.9 2.0e-89 327.0
Blo11g00301 . 439 721 Strubbelig Receptor Gene Family AT4G22130 58.2 1.7e-88 323.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004508 2 2 2 1 0 0 2 0 0 1 1 0 2 1 0 2 0 0 2 0 1 0 0 0 0 1 1 1 0 0 22
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84642 PF00069 Pkinase 2.50E-44 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo13g00991 Blo_Chr13 FPKM 19.900557 21.736696 11.784666 10.95464 75.69384 69.361191 76.943123 2.946859 3.422427 3.031959