Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00994 ATGGAGGGTGGGGCTAATGGCGCCACTGGTCTGATGGCGTTTGGAGAAAATAGTAACGGGCTTTGTTCAATGATGACGATGATGCATGGTATGAGCGCCCATCATACCCATAATCATCCTCATCTTAACTCAAACGCGGAGACTAACAGTCTATTTCTTCCGCTGCCTTCTTCGACTACCAATAATCACGAACAAAATCGTAATAGTAGCAGCGGTTCTTCTTTCATGGTCGAGGACCGTCAAAACAACAGTTCTTGGTATTATTTCATGGACAGCCACAATAATACTGAAAACAACTCTTCTACTGATGTCAAGGCTAAGATCATGGCTCATCCTCACTACCATCGTCTGTTAGCTGCATATCTTAATTGTCAAAAGGTAGGGGCTCCGCCGGAAGTGGTGGTTAAGCTGGAGCAAGCTTGTGCTTCGGTGGCGTCAATGGGCCACGCCGGTGCAGGATGTCTTGGTGAAGATCCAGCGCTAGATCAATTCATGGAAGCCTACTGTGAGATGCTGACCAAATACGAGCAAGAGCTCTCAAAGCCCTTCAAGGAAGCCATGCTTTTTCTTCAAAGAATAGAATGCCAGTTCAAAGCTCTCACTGTTTCTTCAGACACTGGTTGCGAGGGAGGCGAAAGGAATGGATCATCGGAAGAAGAAGTCGATGCGAATGACCAGTGCATTGATCCACAAGCAGAAGATCGGGAGCTCAAGGGTCAGCTTCTGCGCAGGTACAGCGGATATTTAGGAAGCCTGAAGCAGGAATTCATGAAGAAGCGGAAGAAAGGGAAGCTGCCGAAAGAGGCGAGGCAACAGCTACTGGATTGGTGGAGTAGACATTACAAATGGCCTTACCCTTCGGAGACGCAGAAGTTGGCTCTTGCAGAATCGACCGGGTTGGATCAGAAGCAGATAAACAACTGGTTTATAAACCAAAGGAAAAGGCACTGGAAGCCCTCGGAAGACATGCAGTTCGTGGTGATGGATGCAGCCCATCCCCATCCCCATCCCCATCCCCATCCTCAGTATTTCATGGACAGCGCCCTGGGCAATCCTTTTCCCTTGGACATCACACCTGCCTTGCTCTGA 1089 48.76 MEGGANGATGLMAFGENSNGLCSMMTMMHGMSAHHTHNHPHLNSNAETNSLFLPLPSSTTNNHEQNRNSSSGSSFMVEDRQNNSSWYYFMDSHNNTENNSSTDVKAKIMAHPHYHRLLAAYLNCQKVGAPPEVVVKLEQACASVASMGHAGAGCLGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMLFLQRIECQFKALTVSSDTGCEGGERNGSSEEEVDANDQCIDPQAEDRELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSETQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHPHPHPHPQYFMDSALGNPFPLDITPALL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32344218 32346359 - BLOR20046 Blo13g00994 69389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00994 362 MobiDBLite consensus disorder prediction 34 76 - -
Blo13g00994 362 MobiDBLite consensus disorder prediction 37 76 - -
Blo13g00994 362 SMART ELK_2 236 257 IPR005539 GO:0003677
Blo13g00994 362 Pfam ELK domain 236 257 IPR005539 GO:0003677
Blo13g00994 362 SMART HOX_1 258 323 IPR001356 GO:0003677
Blo13g00994 362 MobiDBLite consensus disorder prediction 206 232 - -
Blo13g00994 362 ProSiteProfiles 'Homeobox' domain profile. 256 319 IPR001356 GO:0003677
Blo13g00994 362 Pfam KNOX2 domain 155 201 IPR005541 GO:0003677|GO:0005634
Blo13g00994 362 ProSiteProfiles ELK domain profile. 236 256 IPR005539 GO:0003677
Blo13g00994 362 SMART KNOX2_2 151 202 IPR005541 GO:0003677|GO:0005634
Blo13g00994 362 Gene3D - 261 323 - -
Blo13g00994 362 CDD homeodomain 268 320 IPR001356 GO:0003677
Blo13g00994 362 Pfam Homeobox KN domain 276 315 IPR008422 GO:0003677|GO:0006355
Blo13g00994 362 ProSitePatterns 'Homeobox' domain signature. 294 317 IPR017970 GO:0000981|GO:0006355
Blo13g00994 362 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 350 - -
Blo13g00994 362 SUPERFAMILY Homeodomain-like 258 334 IPR009057 -
Blo13g00994 362 SMART KNOX1_2 102 146 IPR005540 GO:0003677|GO:0005634
Blo13g00994 362 Pfam KNOX1 domain 104 142 IPR005540 GO:0003677|GO:0005634
Blo13g00994 362 PANTHER - 2 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01479 Blo-Chr1:54145214 Blo13g00994 Blo-Chr13:32344218 4.52E-89 dispersed
Blo04g00653 Blo-Chr4:5718728 Blo13g00994 Blo-Chr13:32344218 2.29E-113 dispersed
Blo12g01005 Blo-Chr12:28031041 Blo13g00994 Blo-Chr13:32344218 1.89E-88 dispersed
Blo13g00994 Blo-Chr13:32344218 Blo16g01165 Blo-Chr16:40199397 5.37E-61 dispersed
Blo13g00994 Blo-Chr13:32344218 Blo14g00017 Blo-Chr14:130271 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13200 PF03791 KNOX2 5.10E-21 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00994 - - rcu:8277968 543.117