Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01002 ATGAAAACATCTCAGAAGCACCCGAGTTCAGCCAACATCAAAGGATTGTACCATCAGCCTATGCAAGACATGAAGTCCTATTATTTGTCTCATTTCCATGCGCTAGGAAACACTTCCTGTTCTAACCTTGGCAGCCGAGGGACGATAGTATCCTTCGACTCTTGCGAAGAACAGTTTTTTACTCTCGAATCATCCGCAGCCCCCATTGACGTTGTTCCATGTGATTCCTCCAGTGTCTTGTCAAGCACAAGCTCCATTTACCCACAAGTTTCTCGTTCAAGTTCTTCAGATCCACATCATGTCCATGATAACATAAGCGGATCGCCAGTTAGTGGGGGCTCTGTAAGCACAGGTGATGATAAGTTAAAGCACAAGCTGAGGGAACTGGAGATTTCATTGATGGGACCAGAATCAGATATTGTCAACAGCTGCTACTGCTCTTTCAACGGTGGGACAAATCAAGCCACCTCAATGGCTACTTGGAAGAATCAAATGGTAGCCGTAATTCCCAGATTGAACCTGAAGGAATTACTTATCGGGTGTGCACAATCCATACACGAGGCTGATTTATCGACAGCTATGCATTTTATGAAGGTGTTGGAGCAGACGGTGTCAGTATCTGGGGAGCCATTGCAGAGATTGGGTGCTTATTTGTTGGAGGGGCTGAGAGCAAGGCTGGAAAGATCAGGAAGTTCAATCTACAAGGCTCTTAAGTGTGAGGAGCCGACAAGCTCGGAGTTAATGTCGTATATGTCTATCCTCTATCAAGTCTGTCCCTACTGGAAGTTTGGTTACACATCTGCAAATGTTTTCATTCAAGAAGCCATGGAAAATGAACCCAAAATCCACATTATAGATTTCCAAATTGCACAGGGCAGTCAGTGGATACCGCTCATCCAGGATCTTGCCAAACGAGGCGGAAATGGTGGACCTCCACGTATCCGCATAACTGGTGTAGACGATTCTCTGTCGGCCCATGCTCGGGGAGGGGGACTTCATATCGTAGGGCAGAGGTTATCACAAGTTGCACAATCGTGTGGAGTACGATTCGAGTTCCATGCTGCAGCCATGTTCGGAAGTGAGCTAGAATCGTGTAATCTTGGGGTTCGACCTGGGGAGGCGCTGGCTGTTAACTTTCCTTACGTTTTACATCACATTCCCGATGAGAGTGTGGGCACTCAGAATCATAGAGACCGTTTGTTGAGGTTAGTGAAGAGTTTATCGCCAAAAGTCGTCACCATTGTCGAGCAGGAATCAAACACGAACACTTCCCCATTCCTTTCGAGATTCATCGAGACTTTAGATTATTACACAGCCATGTTCGAATCGATAGACGCAGCTCTGCCAAGAGATGACAAGCAGAGGATCAGAGCAGAGCAGCACTGCGTGGCGAGAGACATAGTGAACATGATAGCCTGCGAGGGTGCAGAACGGTTAGAACGGCATGAACTTCTCGGGAAATGGAGGTCGAGATTGACGATGGCTGGGTTCACGCCTTATCCGTTGAGTTCGGGGGTCACAGATGCGGTGAGAAAATTGTTGAAAGAGTACAGTCAGAATTACAGAGTGGAGGAGAGTAATGGAGCTCTGTATTTGGGGTGGATGAAGAGAGCAATGGTGACTTCATCTGCGTGGAGG 1638 47.25 MKTSQKHPSSANIKGLYHQPMQDMKSYYLSHFHALGNTSCSNLGSRGTIVSFDSCEEQFFTLESSAAPIDVVPCDSSSVLSSTSSIYPQVSRSSSSDPHHVHDNISGSPVSGGSVSTGDDKLKHKLRELEISLMGPESDIVNSCYCSFNGGTNQATSMATWKNQMVAVIPRLNLKELLIGCAQSIHEADLSTAMHFMKVLEQTVSVSGEPLQRLGAYLLEGLRARLERSGSSIYKALKCEEPTSSELMSYMSILYQVCPYWKFGYTSANVFIQEAMENEPKIHIIDFQIAQGSQWIPLIQDLAKRGGNGGPPRIRITGVDDSLSAHARGGGLHIVGQRLSQVAQSCGVRFEFHAAAMFGSELESCNLGVRPGEALAVNFPYVLHHIPDESVGTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLSRFIETLDYYTAMFESIDAALPRDDKQRIRAEQHCVARDIVNMIACEGAERLERHELLGKWRSRLTMAGFTPYPLSSGVTDAVRKLLKEYSQNYRVEESNGALYLGWMKRAMVTSSAWR 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32411281 32412918 - BLOR20054 Blo13g01002 69397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01002 546 MobiDBLite consensus disorder prediction 88 119 - -
Blo13g01002 546 ProSiteProfiles GRAS family profile. 165 546 IPR005202 -
Blo13g01002 546 Pfam GRAS domain family 174 546 IPR005202 -
Blo13g01002 546 PANTHER SCARECROW-LIKE PROTEIN 13 18 545 IPR030005 -
Blo13g01002 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 545 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00135 Blo-Chr2:1150119 Blo13g01002 Blo-Chr13:32411281 0 dispersed
Blo13g01002 Blo-Chr13:32411281 Blo15g00454 Blo-Chr15:6842938 0 dispersed
Blo05g00794 Blo-Chr5:29199863 Blo13g01002 Blo-Chr13:32411281 2.76E-53 transposed
Blo15g00176 Blo-Chr15:1798277 Blo13g01002 Blo-Chr13:32411281 5.21E-71 transposed
Blo13g01002 Blo-Chr13:32411281 Blo14g00035 Blo-Chr14:238850 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13201 PF03514 GRAS 1.00E-127 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01002 - - mcha:111005597 762.296