Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01012 ATGGATCCTATTAATGGTAACAATAGTACGAGTCTCAGCAACAACTCCAATCTTGCTGCAAAGCAACGGCTTCGATGGACACATGAACTTCATGAACGTTTTGTTGATGCCGTGGCTCAGCTTGGTGGGCCAGATCGTGCCACTCCCAAAGGCGTTCTTAGAGTGATGGGTGTGCAAGGTTTAACTATATACCACGTTAAAAGTCATTTACAGAAATATCGACTTGCAAAGTACCTTCCTGATTCATCATCTGATGACAGTTATTATTTTCTGTACATTGTGCAAGGAAAAAATGCTGACAAGAAAGAATCTGGAGATTTACTTTCTAATTTGGATGGATCATCTGGAATGCAAATTACTGAAGCACTAAAGCTACAAATGGAGGTTCAGAAACGACTTCATGAACAATTAGAGGCATTGTTGGTTATTTGTACGCAGGTGCAGAGACATTTACAATTGAGAATTGAAGCGCAAGGCAAGTACTTGAAGAAGATAATTGAAGAGCAACAAAGACTTACTGGGGTTCTTTCAGAAGTTCCAGCTTCTACCATGTCAGCCGCCATATCAGATGTCAAGAATGAGCCAGCAACACCAGGTGCAACCTCCGAATCTCCCCTCCAGGAAAAGGCTGCTAAGCAATGCGCTCTAGCCAAGAGCCTCTCTCTTGACGATTCTCTCTCTTCTTCTCATGAGCCACAAACTCCAGATTCTTGCTGCCACGTCAGCCATCCAGATGAGAGCCCCAAAGGCGAAAGGTCGACTAAGCAACAGGCCATTACAGGTGGAGCCTATGGAAACCCCGAAATGGTACTCACTCATCATATTCTTGAGTCAAGTGCTTCCTTCCAGCAACCTCATTCCATATTTGTGGAGACAGAAGAGGTTAATCCTTCGTCAGGAATTGTAAACAATGAAGATCTAGTTAACCCTAATTCCTGCCATCTGTAA 948 43.46 MDPINGNNSTSLSNNSNLAAKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDDSYYFLYIVQGKNADKKESGDLLSNLDGSSGMQITEALKLQMEVQKRLHEQLEALLVICTQVQRHLQLRIEAQGKYLKKIIEEQQRLTGVLSEVPASTMSAAISDVKNEPATPGATSESPLQEKAAKQCALAKSLSLDDSLSSSHEPQTPDSCCHVSHPDESPKGERSTKQQAITGGAYGNPEMVLTHHILESSASFQQPHSIFVETEEVNPSSGIVNNEDLVNPNSCHL 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32463819 32465999 + BLOR20064 Blo13g01012 69407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01012 315 Gene3D - 20 79 - -
Blo13g01012 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 14 306 - -
Blo13g01012 315 MobiDBLite consensus disorder prediction 223 256 - -
Blo13g01012 315 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Blo13g01012 315 Pfam MYB-CC type transfactor, LHEQLE motif 117 171 IPR025756 -
Blo13g01012 315 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Blo13g01012 315 SUPERFAMILY Homeodomain-like 20 75 IPR009057 -
Blo13g01012 315 MobiDBLite consensus disorder prediction 189 208 - -
Blo13g01012 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 78 IPR017930 -
Blo13g01012 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 14 306 IPR044848 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01197 Blo-Chr7:31821054 Blo13g01012 Blo-Chr13:32463819 5.64E-66 dispersed
Blo09g00342 Blo-Chr9:13843245 Blo13g01012 Blo-Chr13:32463819 2.85E-49 dispersed
Blo13g01012 Blo-Chr13:32463819 Blo02g00231 Blo-Chr2:2205649 8.52E-44 dispersed
Blo13g01012 Blo-Chr13:32463819 Blo14g00044 Blo-Chr14:272266 3.06E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13202 PF14379 Myb_CC_LHEQLE 4.50E-19 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01012 - - hbr:110654981 372.089