Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01016 ATGGTTGGAAATAGGAACTACGAGATCTCAGGGGTGGCGGTGGATATGGCGTGGATGGTGCTCAAGGTTGACCTCTCGCGCCTCTTCCAGCAACTCTTCGGCGTTTACTCTTATGAAAACCACGAAGGGAAGCCCCGGATTTGTCGGGTTAGAAATAAGAAACTGAGACTGGAATCAATCCTTCTATCCATCATGTCCAAGAACAAAGTTGGATACCACCGGAGCATCGATGAATCCGAGGCTGTCTTTGGCTACCAAGAGACAGATCCCTCCGGTCGTTACGGTCGATTGGAAGAAGTTCTGGGGAAGGGAGCCATGAAAACAGTTTACAGAGCAGTTGATGAAGTTCTTGGAATGGAGGTGGCATGGAACCAGATCAAACTGAATGTCGTTCTTCGTACCCCCGAAGATTTGGAGAGGCTGTACTCAGAGGTTCACCTCCTCAGCACCCTCAAGCATGATTCAATCATTCGATTCTACACCTCTTGGATCGACGTCGACAACAAGACCTTCAATTTTATCACCGAAATGTTTACTTCTGGTTCACTCAGAGAATATAGAATGAAATATTGTCGGGTTGACATTCGAGCTATAAAGAATTGGGCACGTCAGATCCTACAAGGGCTCGTTTATCTTCACGAGCACGATCCTCCTATAATTCACAGAGACCTGAAGTGCGATAATATCTTCGTTAATGGTCATCTTGGGCAAGTCAAGATTGGCGATCTTGGGCTTGCAACGATTCTCCGTGGCTCTCAATCGGCTCACAGTGTTATAGGCACACCCGAGTTCATGGCTCCAGAACTATACGAGGAAGATTACAATGCGCTAGTTGATGTCTACTCATTCGGCATGTGTGTTCTTGAGATGCTTACTTCCGAGTATCCTTATAGTGAATGTGCCAACCCTGCTCAAATTTACAAGAAAGTTACTTCTGGGAAGCTTCCTGCATCGTTCTACCGGGTTCAAGATCTCGAGGCACAGCGCTTCATCGGAAAATGTTTGGCCCCTGTTTCAAAGAGAGTTTCCTCGAAAGAACTATTACTCGATCCGTTTCTCTCGGTTGACGAAACTAGAAATGTGCCCGAGGAAAAGTATGAAATCCAGAGGCCATTTTTAAATGCCAAAGAAATGGAGAAATTGCACTTAGGTGATGATTTACCGAGGACGGACATGACAATTACGGGGAAGCTGAATCCTGAGGATGATACCCTCTTCCTCAAGGTTCAAATTGCAGATAACAATGGTTCGGGTAGGAACATATATTTTCCGTTCGACATTGTGAGTGACACGCCAATGGATGTGGCGAGGGAGATGGTGAAGGAGTTAGAGATAAAGGATTGGGAACCGTTTGAGATTGCGGAGATGATCGAGGGCGAAATTTCCGCGCTGGTTCCTAATTCAAAGAGAGATCCCTCGTTTCATCCAGAATCTTATCATGGTTATCAAGAATATGCGGACGTACCCCATCATAGTTTTCACTCTTTCTCATCATCGTCCCAAGCAACATTATGCACTTCTCCGAGGGCAGATGTCGTTAGTTGGTCTCGAGAAGATTTGCTGGATGATAGCAGCTCCCAGAGCTCTTCCCGTTCTTGGAAATATTCGAACTTGAATTATATTTCTGTGGATGAGCACGAGTCGAAGAATAACAAGTTCGCTAGCCATAACTGTGTGCAATCTATATCAGGAACATGTTACAAACAGAGCAAAGGTTTATTACGGCCCCAAGAAGCGTCTTCTTCTAAAGATTTGAGGGCGATGAACCATCGTAAATTGACCAGGAACAGATCGTTTGTCGATGTGCACAGCCAACTACTACACCGGTCCTTGGTCGAGGAAGTGAATCGAAGACGGCTGTTCAAGACAGTTGGAGCAGTGGAAAACATTGGATTTCAAGCCCCGTGCGACGTTTCTCCGAGCCCAAGGGCTGGAAGGGGTTGTGGGGATGCCGATTTTATCAGAAATGCAAGAGCTAGCAAGGCTCAAGGACATCAGAGGAGTAAGTAA 2010 46.07 MVGNRNYEISGVAVDMAWMVLKVDLSRLFQQLFGVYSYENHEGKPRICRVRNKKLRLESILLSIMSKNKVGYHRSIDESEAVFGYQETDPSGRYGRLEEVLGKGAMKTVYRAVDEVLGMEVAWNQIKLNVVLRTPEDLERLYSEVHLLSTLKHDSIIRFYTSWIDVDNKTFNFITEMFTSGSLREYRMKYCRVDIRAIKNWARQILQGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLATILRGSQSAHSVIGTPEFMAPELYEEDYNALVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPASFYRVQDLEAQRFIGKCLAPVSKRVSSKELLLDPFLSVDETRNVPEEKYEIQRPFLNAKEMEKLHLGDDLPRTDMTITGKLNPEDDTLFLKVQIADNNGSGRNIYFPFDIVSDTPMDVAREMVKELEIKDWEPFEIAEMIEGEISALVPNSKRDPSFHPESYHGYQEYADVPHHSFHSFSSSSQATLCTSPRADVVSWSREDLLDDSSSQSSSRSWKYSNLNYISVDEHESKNNKFASHNCVQSISGTCYKQSKGLLRPQEASSSKDLRAMNHRKLTRNRSFVDVHSQLLHRSLVEEVNRRRLFKTVGAVENIGFQAPCDVSPSPRAGRGCGDADFIRNARASKAQGHQRSK 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32507392 32510951 + BLOR20068 Blo13g01016 69411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01016 669 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 74 648 - -
Blo13g01016 669 SUPERFAMILY Protein kinase-like (PK-like) 97 354 IPR011009 -
Blo13g01016 669 SMART serkin_6 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g01016 669 MobiDBLite consensus disorder prediction 641 669 - -
Blo13g01016 669 ProSiteProfiles Protein kinase domain profile. 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g01016 669 Gene3D Transferase(Phosphotransferase) domain 1 178 360 - -
Blo13g01016 669 Gene3D Phosphorylase Kinase; domain 1 78 176 - -
Blo13g01016 669 Pfam Protein kinase domain 98 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g01016 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Blo13g01016 669 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 74 648 - -
Blo13g01016 669 CDD STKc_WNK 93 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00297 Blo-Chr9:12673059 Blo13g01016 Blo-Chr13:32507392 0 dispersed
Blo13g01016 Blo-Chr13:32507392 Blo18g00578 Blo-Chr18:8400628 2.13E-140 dispersed
Blo13g01016 Blo-Chr13:32507392 Blo12g00329 Blo-Chr12:18887379 4.72E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84643 PF00069 Pkinase 1.60E-47 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01016 K08867 - tcc:18591081 788.489